SHOGoiN Cell ID: 0000000-001

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

No.Germ LayerDifferentiation StateSource AgeAnatomy IdCell Type IdAnatomy:level 1Anatomy:level 2Anatomy:level 3Anatomy:level 4-1Anatomy:level 4-2Anatomy:level 5-1Anatomy:level 5-2Anatomy:level 5-3Anatomy:level 6Cell TypeSynonymCL IdUBERON IdImage IdTissue Image ID
14:Mesodermal4:Terminally differentiated6:Fetus 7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult0000000001Immune system classBloodB cellCL:000023640

SHOGoiN Cell Transcriptome

Expression Profile

SAMN02870136

SAMN02870137

SHOGoiN Cell Id0000000-0010000000-001
Project NameSequence Read ArchiveSequence Read Archive
Project IdSRP043513SRP043513
Assay IdSRP043513_T1SRP043513_T2
Project:project TitleSingle Cell RNAseq data and PacBio amplicon sequencing dataSingle Cell RNAseq data and PacBio amplicon sequencing data
Project:project Descriptionhttp://www.ncbi.nlm.nih.gov/sra/SRX620799[accn]http://www.ncbi.nlm.nih.gov/sra/SRX620799[accn]
Project:project Submission Date
Project:organization Name
Project:stable Contact Information
Project:reference Submission Status
Project:reference Authors
Project:reference Title
Project:reference Pubmed Id
Assay:assay TypeTranscriptomeTranscriptome
Assay:assay Factor0000000-0010000000-001
Source Cell:sample IdSAMN02870136SAMN02870137
Source Cell:SHOGoiN Cell Id0000000-0010000000-001
Source Cell:source Cell TypeB cell, IgM expressing B cell, IgA expressing
Source Cell:source OrganismHumanHuman
Source Cell:race Or Strain
Source Cell:age Or Stage
Source Cell:source Tissue Or OrganBloodBlood
Source Cell:source Cell Karyotype
Source Cell:cell Lineage
Source Cell:organism Genetic Information
Source Cell:health Status
Source Cell:source ProviderStanford Blood CenterStanford Blood Center
Technology:assay TechnologyRNA-seqRNA-seq
Technology:assay Detection InstrumentationHiSeq 2000HiSeq 2000
Technology:assay Detection Instrument VendorIlluminaIllumina
Technology:assessed Material
Technology:source Cell Format
Technology:source Cell Preparation MethodSingle cellSingle cell
Technology:source Cell Identidication Method
Technology:source Cell Treatment
Data:data IdSRR1449122SRR1449123
Data:data TypeSequenceSequence
Data:data Processing Method
Data:data Processing Software And Version
Data:data Normalization Method
Data:data Normalization Software Name And Version
Data:data Analytical Software And Version
Data:reference Sequence Source
Data:genome Annotation Ref

SHOGoiN Cell Marker

Cell Type NameImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cellImmune system/blood cell
Cell Type SubclassActivated Bcell Activated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellActivated B CellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellB cellMature B Cell
SHOGoiN Cell Id0000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-0010000000-001
Anatomical LocationBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBloodBlood
Marker Molecule:nameLeukosialin (Galactoglycoprotein, CD43)ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)Tumor necrosis factor receptor superfamily member 8 (CD30L receptor, Ki-1 antigen, Lymphocyte activation antigen CD30, TNFRSF8, D1S166E)Early activation antigen CD69 (Activation inducer molecule, AIM, EA1, Early T-cell activation antigen p60, Leukocyte surface antigen Leu-23, MLR-3, CD69, CLEC2C)CD70 antigen (CD27 ligand, Tumor necrosis factor ligand superfamily member 7, CD70, CD27L, CD27LG, TNFSF7Transferrin receptor protein 1 (TR, TfR, TfR1, Trfr, T9, p90, CD71, TFRC)T-lymphocyte activation antigen CD80 (Activation B7-1 antigen, BB1, CD80, CD28LG, CD28LG1, LAB7)T-lymphocyte activation antigen CD86 (Activation B7-2 antigen, B70, BU63, FUN-1, CD86, CD28LG2)Interleukin-2 receptor subunit alpha, IL-2 receptor subunit alpha, IL-2-RA, IL-2R subunit alpha, IL2-RA (TAC antigen, p55, CD25, IL2RA)Dipeptidyl peptidase 4 (EC:3.4.14.51 Publication) (ADABP, Adenosine deaminase complexing protein 2, Dipeptidyl peptidase IV, DPP IV, T-cell activation antigen CD26, TP103, CD26, DPP4, ADCP2)T-cell-specific surface glycoprotein CD28 (TP44, CD28)CD83 antigen, hCD83 (B-cell activation protein, Cell surface protein HB15, CD83)CD166 antigen (Activated leukocyte cell adhesion molecule, CD166, ALCAM, MEMD)Tumor necrosis factor ligand superfamily member 4 (Glycoprotein Gp34, OX40 ligand, OX40L, CD252, TNFSF4, TXGP1)Tumor necrosis factor ligand superfamily member 10 (Apo-2 ligand, TNF-related apoptosis-inducing ligand, Protein TRAIL, CD253, TNFSF10, APO2L, TRAIL)Tumor necrosis factor receptor superfamily member 13C (B-cell-activating factor receptor, BAFF receptor, BLyS receptor 3, CD268, TNFRSF13C, BAFFR, BR3)ICOS ligand (B7 homolog 2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, ICOSLG, B7H2, B7RP1, ICOSL, KIAA0653)Programmed cell death protein 1(Protein PD-1, hPD-1, CD279, PDCD1, PD1)Toll-like receptor 9 (CD289, TLR9)Fc receptor-like protein 2, FcRL2 (Fc receptor homolog 2, FcRH2, IFGP family protein 4, CD307b, FCRL2, FCRH2, IFGP4, IRTA4, SPAP1)Fc receptor-like protein 4, FcRL4 (Fc receptor homolog 4, FcRH4, hIFGP2, Immune receptor translocation-associated protein 1, CD307d, FCRL4, IFGP2, IRTA1)Fc receptor-like protein 3 (Fc receptor homolog 3, FcRH3, IFGP family protein 3, hIFGP3, Immune receptor translocation-associated protein 3, CD307c, FCRL3, FCRH3, IFGP3, IRTA3, SPAP2)Fc receptor-like protein 1, FcRL1 (Fc receptor homolog 1, hIFGP1, Immune receptor translocation-associated protein 5, CD307a, FCRL1, FCRH1, IFGP1, IRTA5)Fc receptor-like protein 5, FcR-like protein 5, FcRL5 (BXMAS1, Immune receptor translocation-associated protein 2, CD307e, FCRL5, FCRH5, IRTA2)Immunoglobulin superfamily member 8 (CD81 partner 3, Keratinocytes-associated transmembrane protein 4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, EWI2, KCT4)Bone marrow stromal antigen 2 (HM1.24 antigen, Tetherin, CD317, BST2Receptor-type tyrosine-protein phosphatase C (CD45, Leukocyte common antigen, T200)Signal transducer CD24 (Small cell lung carcinoma cluster 4 antigen, CD24, CD24A)ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)B-cell receptor CD22 (B-lymphocyte cell adhesion molecule, BL-CAM, Sialic acid-binding Ig-like lectin 2, Siglec-2, T-cell surface antigen Leu-14, CD22)C-X-C chemokine receptor type 4 (CXC-R4, CXCR-4, FB22, Fusin, HM89, LCR1, Leukocyte-derived seven transmembrane domain receptor, LESTR, Lipopolysaccharide-associated protein 3, LAP-3, LPS-associated protein 3, NPYRL, Stromal cell-derived factor 1 receptor, SDF-1 receptor, CD184, CXCR4)B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)B-lymphocyte antigen CD20 (B-lymphocyte surface antigen B1, Bp35, Leukocyte surface antigen Leu-16, Membrane-spanning 4-domains subfamily A member 1, MS4A1, CD20)Complement receptor type 2 (Cr2, Complement C3d receptor, Epstein-Barr virus receptor, EBV receptor, CD21, CR2, C3DR)Leukocyte antigen CD37 (Tetraspanin-26, Tspan-26, CD37, TSPAN26)Tumor necrosis factor receptor superfamily member 5 (B-cell surface antigen CD40, Bp50, CD40L receptor, CDw40, CD40, TNFRSF5)Beta-galactoside alpha-2,6-sialyltransferase 1 (Alpha 2,6-ST 1, B-cell antigen CD75, ST6Gal I, ST6GalI, Sialyltransferase 1, ST6GAL1, SIAT1)B-cell antigen receptor complex-associated protein alpha chain (Ig-alpha, MB-1 membrane glycoprotein, Membrane-bound immunoglobulin-associated protein, Surface IgM-associated protein, CD79a, IGA, MB1)B-cell antigen receptor complex-associated protein beta chain (B-cell-specific glycoprotein B29, Ig-beta, Immunoglobulin-associated B29 protein, CD79b)Low affinity immunoglobulin gamma Fc region receptor II-a (IgG Fc receptor II-a, CDw32, Fc-gamma RII-a, Fc-gamma-RIIa, FcRII-a, CD32, FCGR2A)Low affinity immunoglobulin gamma Fc region receptor II-b (IgG Fc receptor II-b, CDw32, Fc-gamma RII-b, Fc-gamma-RIIb, FcRII-b, CD32, FCGR2B, FCG2, IGFR2)Low affinity immunoglobulin gamma Fc region receptor II-c (IgG Fc receptor II-c, CDw32, Fc-gamma RII-c, Fc-gamma-RIIc, FcRII-c, CD32, FCGR2C, FCG2, IGFR2)Complement receptor type 1 (C3b/C4b receptor, CD35, CR1, C3BR)Ectonucleoside triphosphate diphosphohydrolase 1 ( NTPDase 1, Ecto-ATP diphosphohydrolase 1, Ecto-ATPase 1, Ecto-apyrase, Lymphoid cell activation antigen, CD39, ENTPD1)CD48 antigen (B-lymphocyte activation marker BLAST-1, BCM1 surface antigen, Leukocyte antigen MEM-102, SLAM family member 2, SLAMF2, Signaling lymphocytic activation molecule 2, TCT.1, CD48)Integrin alpha-2 (CD49 antigen-like family member B, Collagen receptor, Platelet membrane glycoprotein Ia, GPIa, VLA-2 subunit alpha, CD49b, ITGA2, CD49B)Integrin alpha-3 (CD49 antigen-like family member C, FRP-2, Galactoprotein B3, GAPB3, VLA-3 subunit alpha, CD49c, ITGA3, MSK18)Integrin alpha-4 (CD49 antigen-like family member D, Integrin alpha-IV, VLA-4 subunit alpha, ITGA4, CD49D)CAMPATH-1 antigen (CDw52, Cambridge pathology 1 antigen, Epididymal secretory protein E5, Human epididymis-specific protein 5, He5, CD52)B-cell differentiation antigen CD72 (Lyb-2, CD72)HLA class II histocompatibility antigen gamma chain (HLA-DR antigens-associated invariant chain, Ia antigen-associated invariant chain, p33, CD74, DHLAG)CD75sCD78SLAM family member 5 (Cell surface antigen MAX.3, Hly9-beta, Leukocyte differentiation antigen CD84, Signaling lymphocytic activation molecule 5, CD84, SLAMF5)4F2 cell-surface antigen heavy chain (4F2hc, 4F2 heavy chain antigen, Lymphocyte activation antigen 4F2 large subunit, Solute carrier family 3 member 2, CD98, SLC3A2, MDU1)CD99 antigen (12E7, E2 antigen, Protein MIC2, T-cell surface glycoprotein E2, CD99, MIC2X)Intercellular adhesion molecule 2 (ICAM-2, Lymphocyte function-associated AG-1 counter-receptor, CD102, Icam2)Interferon gamma receptor 1 (IFN-gamma receptor 1, IFN-gamma-R1, CDw119, CD119, IFNGR1)Interleukin-1 receptor type 2 (IL-1R-2, IL-1RT2, CD121 antigen-like family member B, CDw121b, IL-1R-beta, Interleukin-1 receptor type II, CD121b, IL1R2, IL1RB)Interleukin-4 receptor subunit alpha (IL-4 receptor subunit alpha, IL-4R subunit alpha, IL-4R-alpha, IL-4RA, CD124, IL4R, IL4RA)Neural cell adhesion molecule L1 (NCAM-L1, CD171, L1CAM, CAML1, MIC5)CDw210CD213a1CD213a2T-lymphocyte surface antigen Ly-9 ( Cell surface molecule Ly-9, Lymphocyte antigen 9, SLAM family member 3, SLAMF3, Signaling lymphocytic activation molecule 3, CD229, LY9)C-X-C chemokine receptor type 5 (CXCR-5, Monocyte-derived receptor 15, MDR-15, CD185, CXCR5, BLR1, MDR15)C-C chemokine receptor type 2 (CC-CKR-2, CCR-2, CCR2, Monocyte chemoattractant protein 1 receptor, MCP-1-R, CD192, CMKBR2)C-C chemokine receptor type 6 (CCR-6, Chemokine receptor-like 3, CKR-L3, DRY6, G-protein coupled receptor 29, GPR-CY4, GPRCY4, LARC receptor, CD196, CCR6, GPR29)Interleukin-18 receptor 1 (IL-18R-1, IL-18R1, CD218 antigen-like family member A, CDw218a, IL1 receptor-related protein, IL-1Rrp, IL1R-rp, CD218a)Interleukin-18 receptor accessory protein (IL-18 receptor accessory protein, IL-18RAcP, AcPL, CD218 antigen-like family member B, CDw218b, IL-1RAcPL, Interleukin-1 receptor 7, IL-1R7, Interleukin-18 receptor beta, IL-18R-beta, IL-18Rbeta, CD218b)Tumor necrosis factor receptor superfamily member 13B (Transmembrane activator and CAML interactor, CD267, TACI, TNFRSF13B)Tumor necrosis factor receptor superfamily member 13C (B-cell-activating factor receptor, BAFF receptor, BAFF-R, BLyS receptor 3, CD268, BAFFR, BR3)Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein, CD269, BCMA, BCM, TNFRSF17)ICOS ligand (B7 homolog 2, B7-H2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, B7H2, B7RP1, ICOSL, KIAA0653)Butyrophilin subfamily 3 member A2 (BTN3A2, BT3.2, BTF3, BTF4) Butyrophilin subfamily 3 member A1 (CD277, BTN3A1, BTF5)Leukocyte-associated immunoglobulin-like receptor 1 (LAIR-1, hLAIR1, CD305, LAIR1)Fc receptor-like protein 5 (FcR-like protein 5, BXMAS1, Immune receptor translocation-associated protein 2, CD307, CD307e, FCRL5, IRTA2)Immunoglobulin superfamily member 8, IgSF8 (CD81 partner 3, EWI-2, Keratinocytes-associated transmembrane protein 4, KCT-4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, EWI2, KCT4)Bone marrow stromal antigen 2 (CD317, BST-2, HM1.24 antigen, Tetherin, BST2)Junctional adhesion molecule B (JAM-B, Junctional adhesion molecule 2, JAM-2, Vascular endothelial junction-associated molecule, VE-JAM, CD322, JAM2, C21orf43, VEJAM)Sialic acid-binding Ig-like lectin 6 (Siglec-6, CD33 antigen-like 1, CDw327, Obesity-binding protein 1, OB-BP1, CD327, SIGLEC6, CD33L, OBBP1)B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)
Marker Molecule:typeProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinRNA
Marker Molecule:categoryCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD moleculeCD molecule
Subcellular LocalizationPlasma membranePlasma membranePlasma membrane, CytosolPlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membraneEndoplasmic reticulum, plasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membrane, Golgi apparatusPlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membrane, SecretedPlasma membrane, SecretedPlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membrane, SecretedPlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membrane, SecretedPlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membranePlasma membrane
Uniprot IdP16150P28907P28908Q07108P32970P02786P33681P42081P01589P27487P10747Q01151Q13740P23510P50591Q96RJ3O75144Q15116Q9NR96Q96LA5 Q96PJ5Q96P31 Q96LA6Q96RD9Q969P0 Q10589P08575P25063P28907P20273P61073P15391P11836 P20023P11049P25942P15907P11912P40259 P12318P31994P31995P17927P49961P09326P17301P26006P13612 P31358P21854P04233Q9UIB8P08195P14209P13598P15260P27930P24394P32004Q9HBG7P32302P41597P51684Q13478 O95256O14836Q96RJ3Q02223O75144Q96RD9Q969P0 Q10589 P15391
Gene Id930
Source OrganismHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHuman
Reference22184681https://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=IM2651U#2/10//0/25/1/0/asc/2/IM2651U///0/1//0/https://www.bdbiosciences.com/documents/cd_marker_handbook.pdfhttps://www.bdbiosciences.com/documents/cd_marker_handbook.pdfhttps://www.bdbiosciences.com/documents/cd_marker_handbook.pdfhttps://www.bdbiosciences.com/documents/cd_marker_handbook.pdfhttps://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=A07409#2/10//0/25/1/0/asc/2/A07409///0/1//0/20839338

Image

SHOGoiN Cell Id0000000-001
Image Id

40

TissueImmune system (blood)
Cell TypeB cell
OrganismHuman
Cell Strain
LocationPancreas
Karyotype
RaceJapanese
Age50
SexMale
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Diseasemalignant pleural mesothelioma
Cod
Shooting Date2007.7.23
Shooting Conditionnormal or mild columnar epithelium hyperplasia
EmbeddingParaffin
StainingHematoxylin
MicroscopeOLYMPUS DX50
CameraOLYMPUS DP20
Image Size X1600
Image Size Y1200
Resolution72
Magnification400
Contact PersonKoji Yamanegi
Emailyamanegi@hyo-med.ac.jp
Telephone0798-45-6432
Fax0798-45-6431
AffiliationDepartment of clinical pathology, Hyogo collage of medicine
Zip Code663-8501
Address1-1, Mukogawa, Nishinomiya, Hyogo
CountryJapan
Note
Nucleous Area646
Nucleous Circularity0.88
Nucleous Bending698
Nucleous Convex Area67804.1
Nucleous Ellipse Long Axis31.18
Nucleous Inertia1.51
Cell Area3629.5
Cell Circularity0.49
Cell Bending3.73
Cell Convex Area4243
Cell Ellipse Long Axis94.21
Cell Inertia2.61E+06
Cell-nucleous Area Ratio0.18
Cell-nucleous Eccentricity10.04
Cell-nucleous Eccentricity20.02
Cell-nucleous Eccentricity30.08
Cell-nucleous Eccentricity40.06