SHOGoiN Cell ID: 018

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

Differentiated (31)
Stem (0)
Embryo (0)

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Cell Type	CL Id	UBERON Id	Tissue Image ID
1	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010000000000000000000	018	Head	Brain						Astrocyte	CL:0000127
2	2:Ectodermal	4:Terminally differentiated	6:Fetus 7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010002000000000000000	018	Head	Brain		Blood-brain barrier				Astrocyte	CL:0000127
3	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010100010000000000000	018	Head	Brain	Cerebellum		White matter			Astrocyte	CL:0000127		t161
4	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010200000000000000000	018	Head	Brain	Cerebrum					Astrocyte	CL:0000127
5	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010200010000000000000	018	Head	Brain	Cerebrum		White matter			Astrocyte	CL:0000127
6	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000000000000000	018	Head	Brain	Cerebrum	Cerebral cortex				Astrocyte	CL:0000127	UBERON:0005392
7	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000200000000000	018	Head	Brain	Cerebrum	Cerebral cortex		Cortical layer II (external granular layer)		Astrocyte	CL:0000127	UBERON:0005391
8	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000300000000000	018	Head	Brain	Cerebrum	Cerebral cortex		Cortical layer III (external pyramidal layer)		Astrocyte	CL:0000127	UBERON:0005392
9	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000400000000000	018	Head	Brain	Cerebrum	Cerebral cortex		Cortical layer IV (internal granular layer)		Astrocyte	CL:0000127	UBERON:0005393
10	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000500000000000	018	Head	Brain	Cerebrum	Cerebral cortex		Cortical layer V (internal pyramidal layer)		Astrocyte	CL:0000127	UBERON:0005394
11	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000600000000000	018	Head	Brain	Cerebrum	Cerebral cortex		Cortical layer VI (multiform layer)		Astrocyte	CL:0000127	UBERON:0005395
12	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201000700000000000	018	Head	Brain	Cerebrum	Cerebral cortex		Neocortex		Astrocyte	CL:0000127
13	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010201030000000000000	018	Head	Brain	Cerebrum	Cerebral cortex	Temporal lobe			Astrocyte	CL:0000127
14	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010202040200000000000	018	Head	Brain	Cerebrum	Hippocampal formation	Hippocampus CA1	Stratum lacnosum moleculare		Astrocyte	CL:0000127	UBERON:0014557
15	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010202050200000000000	018	Head	Brain	Cerebrum	Hippocampal formation	Hippocampus CA2	Stratum lacnosum moleculare		Astrocyte	CL:0000127	UBERON:0014558
16	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010202060200000000000	018	Head	Brain	Cerebrum	Hippocampal formation	Hippocampus CA3	Stratum lacnosum moleculare		Astrocyte	CL:0000127	UBERON:0014559
17	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010203000000000000000	018	Head	Brain	Cerebrum	Amygdala				Astrocyte	CL:0000127
18	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000000000000000	018	Head	Brain	Cerebrum	Basal ganglia				Astrocyte	CL:0000127
19	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000100000000000	018	Head	Brain	Cerebrum	Basal ganglia		Striatum		Astrocyte	CL:0000127
20	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000101000000000	018	Head	Brain	Cerebrum	Basal ganglia		Striatum	Caudate nucleus	Astrocyte	CL:0000127
21	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000102000000000	018	Head	Brain	Cerebrum	Basal ganglia		Striatum	Putamen	Astrocyte	CL:0000127
22	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000200000000000	018	Head	Brain	Cerebrum	Basal ganglia		Subthalamic nucleus		Astrocyte	CL:0000127
23	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000300000000000	018	Head	Brain	Cerebrum	Basal ganglia		Globus pallidus		Astrocyte	CL:0000127
24	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000400000000000	018	Head	Brain	Cerebrum	Basal ganglia		Lentiform nucleus		Astrocyte	CL:0000127
25	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000500000000000	018	Head	Brain	Cerebrum	Basal ganglia		Substantia nigra		Astrocyte	CL:0000127
26	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000700000000000	018	Head	Brain	Cerebrum	Basal ganglia		Nucleus basalis of Meynert		Astrocyte	CL:0000127
27	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	1010204000800000000000	018	Head	Brain	Cerebrum	Basal ganglia		Claustrum		Astrocyte	CL:0000127
28	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	3150300000000000000000	018	Trunk	Spinal cord	White matter of spinal cord					Astrocyte	CL:0002606
29	2:Ectodermal	4:Terminally differentiated	4:Neurula	7110002011500000000000	018	Embryo	Neurula		Neural tube	Neural crest	Telencephalon		Astrocyte
30	2:Ectodermal	4:Terminally differentiated	4:Neurula	7110002000100000000000	018	Embryo	Neurula		Neural tube		Prosencephalon (forebrain)		Astrocyte	CL:0000127
31	2:Ectodermal	4:Terminally differentiated	7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult	7110002000101000000000	018	Embryo	Neurula		Neural tube		Prosencephalon (forebrain)	White matter	Astrocyte	CL:0000127

Strongylocentrotus purpuratus cell

No.	Germ Layer Id	Differentiation State Id	Source Age Id	Anatomy Id	Cell Id	Anatomy:level 1	Anatomy:level 2	Anatomy:level 3	Anatomy:level 4-1	Anatomy:level 4-2	Anatomy:level 5-1	Anatomy:level 5-2	Anatomy:level 5-3	Anatomy:level 6	Cell Type
1	2:Ectodermal	3:Multipotent/Progenitor/Precursor	9:Gastrula	1280000	018	Embryo	Gastrula	Animal plate							Non-neural progenitor

SHOGoiN Cell Conversion

Source Cell Type	Stem cell	Cell	Stem cell	Stem cell	Stem cell	Stem cell
Source Cell Name	Hematopoietic stem cell	Fibroblast	Bone marrow-derived mesenchymal stem cell	Oligodendrocyte precursor cell	Astrocyte precursor cell	Astrocyte precursor cell
Source Cell Type Id	724	120	970	909	910	910
Destination Cell Type	Cell	Cell	Cell	Cell	Cell	Cell
Destination Cell Name	Astrocyte	Astrocyte	Astrocyte	Astrocyte	Astrocyte	Astrocyte
Destination Cell Type Id	018	018	018	018	018	018
Differentiation Type	Transdifferentiation	Transdifferentiation	Differentiation	Differentiation	Differentiation	Differentiation
Reference	PMID:26004181	PMID:25556566	PMID:19127447	PMID:23395447	PMID:18820411	PMID:24140262