SHOGoiN Cell ID: 2010301000002000000000-028
SHOGoiN Cell Taxonomy
Homo sapiens & Mus musculus cell
No. | Germ Layer | Differentiation State | Source Age | Anatomy Id | Cell Type Id | Anatomy:body Part | Anatomy:organ | Anatomy:sub-organ | Anatomy:tissue 1 | Anatomy:tissue 2 | Anatomy:tissue 3 | Anatomy:tissue 4 | Anatomy:tissue 5-1 | Anatomy:tissue 5-2 | Anatomy:tissue 5-3 | Anatomy:tissue 5-4 | Cell Type | Synonym | CL Id | UBERON Id | Image Id | Tissue Image ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 2 Ecotodermal | 4 Terminally differentiated | 6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult | 2010301000002000000000 | 028 | Neck | Pharynx | Nasopharynx | Mucosa | Stratified squamous epithelium | Basal cell | CL:0000646 | 486, 487 |
Image
SHOGoiN Cell Id | 2010301000002000000000-028 | 2010301000002000000000-028 |
---|---|---|
Image Id | 486 | 487 |
Tissue | Pharynx | Pharynx |
Cell Type | Basal cell | Basal cell |
Organism | Human | Human |
Cell Strain | ||
Location | Pharynx | Pharynx |
Karyotype | ||
Race | Japanese | Japanese |
Age | 81 | 81 |
Sex | male | male |
Medium | ||
Serum | ||
Other Chemical | ||
Feeder | ||
Other Treatment | ||
Culture Period | ||
Differentiaion | ||
Self Renewal Ability | ||
Onocogenic Transformation | ||
Knock Out Gene | ||
Knock In Gene | ||
Disease | squamous cell carcinoma | squamous cell carcinoma |
Cod | ||
Shooting Date | 2011.9.22 | 2011.9.22 |
Shooting Condition | normal or mild epithelium hyperplasia | normal or mild epithelium hyperplasia |
Embedding | paraffin | paraffin |
Staining | hematoxylin | hematoxylin |
Microscope | OLYMPUS BX50 | OLYMPUS BX50 |
Camera | OLYMPUS DP20 | OLYMPUS DP20 |
Image Size X | 1600 | 1600 |
Image Size Y | 1200 | 1200 |
Resolution | 72 | 72 |
Magnification | 400 | 400 |
Contact Person | Koji Yamanegi | Koji Yamanegi |
yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | |
Telephone | 0798-45-6432 | 0798-45-6432 |
Fax | 0798-45-6431 | 0798-45-6431 |
Affiliation | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine |
Zip Code | 663-8501 | 663-8501 |
Address | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo |
Country | Japan | Japan |
Note | ||
Nucleous Area | 527.5 | 704 |
Nucleous Circularity | 0.852425 | 0.7255 |
Nucleous Bending | 1.14286 | 2.42857 |
Nucleous Convex Area | 574 | 770 |
Nucleous Ellipse Long Axis | 31.4255 | 44.4599 |
Nucleous Inertia | 47725.1 | 104587 |
Cell Area | 1871 | 2213.5 |
Cell Circularity | 0.367918 | 0.435615 |
Cell Bending | 4.70642 | 4.13953 |
Cell Convex Area | ||
Cell Ellipse Long Axis | 70.6618 | 82.1994 |
Cell Inertia | 765333 | 1164450 |
Cell-nucleous Area Ratio | 0.281935 | 0.318048 |
Cell-nucleous Eccentricity1 | 0.232366 | 0.091029 |
Cell-nucleous Eccentricity2 | 0.114096 | 0.0384708 |
Cell-nucleous Eccentricity3 | 0.376583 | 0.156245 |
Cell-nucleous Eccentricity4 | 0.256551 | 0.0711266 |