SHOGoiN Cell ID: 2010301000002000000000-028
SHOGoiN Cell Taxonomy
Homo sapiens & Mus musculus cell
| No. | Germ Layer | Differentiation State | Source Age | Anatomy Id | Cell Type Id | Anatomy:body Part | Anatomy:organ | Anatomy:sub-organ | Anatomy:tissue 1 | Anatomy:tissue 2 | Anatomy:tissue 3 | Anatomy:tissue 4 | Anatomy:tissue 5-1 | Anatomy:tissue 5-2 | Anatomy:tissue 5-3 | Anatomy:tissue 5-4 | Cell Type | Synonym | CL Id | UBERON Id | Image Id | Tissue Image ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 Ecotodermal | 4 Terminally differentiated | 6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult | 2010301000002000000000 | 028 | Neck | Pharynx | Nasopharynx | Mucosa | Stratified squamous epithelium | Basal cell | CL:0000646 | 486, 487 |
Image
| SHOGoiN Cell Id | 2010301000002000000000-028 | 2010301000002000000000-028 |
|---|---|---|
| Image Id |  486 |  487 |
| Tissue | Pharynx | Pharynx |
| Cell Type | Basal cell | Basal cell |
| Organism | Human | Human |
| Cell Strain | ||
| Location | Pharynx | Pharynx |
| Karyotype | ||
| Race | Japanese | Japanese |
| Age | 81 | 81 |
| Sex | male | male |
| Medium | ||
| Serum | ||
| Other Chemical | ||
| Feeder | ||
| Other Treatment | ||
| Culture Period | ||
| Differentiaion | ||
| Self Renewal Ability | ||
| Onocogenic Transformation | ||
| Knock Out Gene | ||
| Knock In Gene | ||
| Disease | squamous cell carcinoma | squamous cell carcinoma |
| Cod | ||
| Shooting Date | 2011.9.22 | 2011.9.22 |
| Shooting Condition | normal or mild epithelium hyperplasia | normal or mild epithelium hyperplasia |
| Embedding | paraffin | paraffin |
| Staining | hematoxylin | hematoxylin |
| Microscope | OLYMPUS BX50 | OLYMPUS BX50 |
| Camera | OLYMPUS DP20 | OLYMPUS DP20 |
| Image Size X | 1600 | 1600 |
| Image Size Y | 1200 | 1200 |
| Resolution | 72 | 72 |
| Magnification | 400 | 400 |
| Contact Person | Koji Yamanegi | Koji Yamanegi |
| yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | |
| Telephone | 0798-45-6432 | 0798-45-6432 |
| Fax | 0798-45-6431 | 0798-45-6431 |
| Affiliation | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine |
| Zip Code | 663-8501 | 663-8501 |
| Address | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo |
| Country | Japan | Japan |
| Note | ||
| Nucleous Area | 527.5 | 704 |
| Nucleous Circularity | 0.852425 | 0.7255 |
| Nucleous Bending | 1.14286 | 2.42857 |
| Nucleous Convex Area | 574 | 770 |
| Nucleous Ellipse Long Axis | 31.4255 | 44.4599 |
| Nucleous Inertia | 47725.1 | 104587 |
| Cell Area | 1871 | 2213.5 |
| Cell Circularity | 0.367918 | 0.435615 |
| Cell Bending | 4.70642 | 4.13953 |
| Cell Convex Area | ||
| Cell Ellipse Long Axis | 70.6618 | 82.1994 |
| Cell Inertia | 765333 | 1164450 |
| Cell-nucleous Area Ratio | 0.281935 | 0.318048 |
| Cell-nucleous Eccentricity1 | 0.232366 | 0.091029 |
| Cell-nucleous Eccentricity2 | 0.114096 | 0.0384708 |
| Cell-nucleous Eccentricity3 | 0.376583 | 0.156245 |
| Cell-nucleous Eccentricity4 | 0.256551 | 0.0711266 |