SHOGoiN Cell ID: 3040000040100000000000-043

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

No.Germ LayerDifferentiation StateSource AgeAnatomy IdCell Type IdAnatomy:body PartAnatomy:organAnatomy:sub-organAnatomy:tissue 1Anatomy:tissue 2Anatomy:tissue 3Anatomy:tissue 4Anatomy:tissue 5-1Anatomy:tissue 5-2Anatomy:tissue 5-3Anatomy:tissue 5-4Cell TypeSynonymCL IdUBERON IdImage IdTissue Image ID
14 Mesodermal4 Terminally differentiated6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult3040000040100000000000043TrunkHeartMyocardiumSinoatrial nodeCardiomyocyteCL:0000746381t016, t017, t018

SHOGoiN Cell Marker

Cell Type NameCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac stem/progenitor cellCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyteCardiac:cardiomyocyte
Cell Type SubclassImmatureImmatureImmatureImmatureImmatureImmature
SHOGoiN Cell Id3040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-0433040000040100000000000-043
Anatomical LocationHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeartHeart
Marker Molecule:nameHematopoietic progenitor cell antigen CD34 (CD34)Mast/stem cell growth factor receptor Kit (SCFR, Proto-oncogene c-Kit, KIT, CD117)Integrin beta 1 (Fibronectin receptor subunit beta, Glycoprotein Iia, CD29)Stage-specific embryonic antigen 1 (SSEA1, CD15)ETS translocation variant 2 (Ets-related protein 71, ETV2, ER71)ATP-binding cassette sub-family G member 2 (ABCG2)Lymphocyte antigen 6A-2/6E-1 (Sca-1, Ly-6)Mast/stem cell growth factor receptor Kit (SCFR, Piebald trait protein, PBT, Proto-oncogene c-Kit, Tyrosine-protein kinase Kit, p145 c-kit, v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog, CD117, KIT, SCFR)Transcription factor GATA-4Insulin gene enhancer protein ISL-1 (Islet-1)Homeobox protein Nkx-2.5T-box transcription factor TBX18Wilms tumor protein (WT1)T-box transcription factor TBX20 (T-box protein 20, TBX20)Myocyte-specific enhancer factor 2C (MEF2C)Myosin-6 (Myosin heavy chain 6, MyHC-alpha, MYH6)Troponin T, cardiac muscle (TnTc, Cardiac muscle troponin T, TNNT2)Troponin I, cardiac muscle (Cardiac troponin I, TNNI3)Myosin regulatory light chain 2, ventricular/cardiac muscle isoform (MLC-2v, MYL2)EMILIN-2 (Elastin microfibril interface-located protein 2, FOAP-10, EMILIN2)Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1, SHPS-1, p84, CD172a, SIRPA)Desmin (DES)Gap junction alpha-4 protein (Connexin-37/GJA4)Gap junction alpha-5 protein (Connexin-40/GJA5)alpha-SarcoglycanTeratocarcinoma-derived growth factor 1 (Cripto-1 growth factor)Transcription factor GATA-4Transcription factor GATA-6Homeobox protein Nkx-2.5 (Nkx2.5)
Marker Molecule:typeProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProteinProtein
Marker Molecule:categoryCD moleculeCD moleculeCD moleculeCD moleculeTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorSkeletalSkeletalSkeletalSkeletalSecretedCD moleculeGlycoproteinTranscription factorTranscription factorTranscription factor
Subcellular LocalizationPlasma membranePlasma membranePlasma membranePlasma membraneNucleusPlasma membranePlasma membranePlasma membraneNucleusNucleusNucleusNucleusNucleusNucleusNucleusCytosolCytosolCytosolCytosolExtracellular matrixPlasma membraneCytosol, Plasma membranePlasma membranePlasma membranePlasma membranePlasma membraneNucleusNucleusNucleus
Uniprot IdP28906P10721P05556O00321Q9UNQ0P05533P10721P43694P61371P52952O95935P19544Q9UMR3Q06413P13533P45379P19429P10916Q9BXX0P78324P17661P35212P36382Q16586P13385P43694Q92908P52952
Gene Id
Source OrganismHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHuman
ReferencePMID:16386630PMID:21895965PMID:22343916PMID:21111494PMID:25861413PMID:20026668https://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/pathways/embryonic-induced-pluripotent-stem-cell-differentiation-pathways-lineage-specific-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markersPMID:22226352PMID:22226352PMID:22226352PMID:22226352PMID:22226352PMID:22226352PMID:22226352PMID:22226352https://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markershttps://www.rndsystems.com/research-area/cardiac-stem-cell-markers

Image

SHOGoiN Cell Id3040000040100000000000-043
Image Id

381

TissueHeart
Cell TypeCcardiomyocyte
OrganismHuman
Cell Strain
LocationHeart
Karyotype
RaceJapanese
Age82
Sexfemale
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Diseasechronic renal failure and diabetes
Cod
Shooting Date2010.12.10
Shooting Conditionnormal tissue or mild atrophia
Embeddingparaffin
Staininghematoxylin
MicroscopeOLYMPUS BX50
CameraOLYMPUS DP20
Image Size X1600
Image Size Y1200
Resolution72
Magnification400
Contact PersonKoji Yamanegi
Emailyamanegi@hyo-med.ac.jp
Telephone0798-45-6432
Fax0798-45-6431
AffiliationDepartment of clinical pathology, Hyogo collage of medicine
Zip Code663-8501
Address1-1, Mukogawa, Nishinomiya, Hyogo
CountryJapan
Note
Nucleous AreaNA
Nucleous CircularityNA
Nucleous BendingNA
Nucleous Convex AreaNA
Nucleous Ellipse Long AxisNA
Nucleous InertiaNA
Cell AreaNA
Cell CircularityNA
Cell BendingNA
Cell Convex AreaNA
Cell Ellipse Long AxisNA
Cell InertiaNA
Cell-nucleous Area RatioNA
Cell-nucleous Eccentricity1NA
Cell-nucleous Eccentricity2NA
Cell-nucleous Eccentricity3NA
Cell-nucleous Eccentricity4NA