SHOGoiN Cell ID: 3110001010000000000000-020

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

No.Germ LayerDifferentiation StateSource AgeAnatomy IdCell Type IdAnatomy:body PartAnatomy:organAnatomy:sub-organAnatomy:tissue 1Anatomy:tissue 2Anatomy:tissue 3Anatomy:tissue 4Anatomy:tissue 5-1Anatomy:tissue 5-2Anatomy:tissue 5-3Anatomy:tissue 5-4Cell TypeSynonymCL IdUBERON IdImage IdTissue Image ID
13 Endodermal4 Terminally differentiated6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult3110001010000000000000020TrunkPancreasEndocrine pancreasIslet of LangerhansAlpha cellCL:0000171390, 391, 392t072

SHOGoiN Cell Transcriptome

Expression Profile

GSM1901456

GSM1901466

GSM1901470

GSM1901473

GSM1901475

GSM1901480

GSM1901484

GSM1901486

GSM1901487

GSM1901488

GSM1901489

GSM1901493

GSM1901495

GSM1901497

GSM1901515

GSM1901516

GSM1901522

GSM1901524

SHOGoiN Cell Id3110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-020
Project NameSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read ArchiveSequence Read Archive
Project IdSRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464SRP064464
Assay IdSRP064464_T2SRP064464_T12SRP064464_T16SRP064464_T18SRP064464_T20SRP064464_T24SRP064464_T28SRP064464_T30SRP064464_T31SRP064464_T32SRP064464_T33SRP064464_T37SRP064464_T39SRP064464_T41SRP064464_T55SRP064464_T56SRP064464_T62SRP064464_T64
Project:project TitleSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypesSingle-cell transcriptomics reveals unique features of human pancreatic islet cell subtypes
Project:project Descriptionhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73727
Project:project Submission Date5-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-155-Oct-15
Project:organization NameCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of SciencesCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Project:stable Contact InformationChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.atChristoph Bock, cbock@cemm.oeaw.ac.at
Project:reference Submission StatusPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublishedPublished
Project:reference AuthorsLi J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.Li J, Klughammer J, Farlik M, Penz T et al.
Project:reference TitleSingle-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.Single-cell transcriptomes reveal characteristic features of human pancreatic islet cell types.
Project:reference Pubmed Id266912122669121226691212266912122669121226691212266912122669121226691212266912122669121226691212266912122669121226691212266912122669121226691212
Assay:assay TypeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptomeTranscriptome
Assay:assay Factor3110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-020
Source Cell:sample IdGSM1901456GSM1901466GSM1901470GSM1901473GSM1901475GSM1901480GSM1901484GSM1901486GSM1901487GSM1901488GSM1901489GSM1901493GSM1901495GSM1901497GSM1901515GSM1901516GSM1901522GSM1901524
Source Cell:SHOGoiN Cell Id3110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-020
Source Cell:source Cell TypeAlpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)Alpha cell (Pancreatic islet)
Source Cell:source OrganismHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHuman
Source Cell:race Or StrainMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMaleMale
Source Cell:age Or Stage37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o37 y/o
Source Cell:source Tissue Or OrganPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreasPancreas
Source Cell:source Cell Karyotype
Source Cell:cell Lineage
Source Cell:organism Genetic Information
Source Cell:health StatusBMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22 BMI was 22
Source Cell:source Provider
Technology:assay TechnologyRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-SeqRNA-Seq
Technology:assay Detection InstrumentationHiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000HiSeq 2000
Technology:assay Detection Instrument VendorIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIlluminaIllumina
Technology:assessed MaterialpolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNApolyA RNA
Technology:source Cell Format
Technology:source Cell Preparation MethodSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, culturedSingle cell, cultured
Technology:source Cell Identidication Method
Technology:source Cell Treatment
Data:data IdSRR2558112SRR2558122SRR2558126SRR2558129SRR2558131SRR2558136SRR2558140SRR2558142SRR2558143SRR2558144SRR2558145SRR2558149SRR2558151SRR2558153SRR2558171SRR2558172SRR2558178SRR2558180
Data:data TypeSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequenceSequence
Data:data Processing Method
Data:data Processing Software And Version
Data:data Normalization MethodTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sampleTab-delimited text files include transcript-wise RPKM values or read counts for each sample
Data:data Normalization Software Name And Version
Data:data Analytical Software And Version
Data:reference Sequence Sourcehg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19hg19
Data:genome Annotation Ref

SHOGoiN Cell Marker

Cell Type NameAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cellAlpha cell
Cell Type Subclass
SHOGoiN Cell Id3110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-0203110001010000000000000-020
Anatomical LocationPancreasPancreasPancreasPancreasPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of LangerhansPancreas, islet of Langerhans
Marker Molecule:nameGlucagon Glucagon Homeobox protein CDX-2 (Cdx2/3)Transthyretin (ATTR, Prealbumin, TBPA, TTR, PALB)Lysyl oxidase homolog 4 (Lysyl oxidase-like protein 4, Lysyl oxidase-related protein C, LOXL4, LOXC)1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 (Pancreas-enriched phospholipase C, Phosphoinositide phospholipase C-epsilon-1, Phospholipase C-epsilon-1, PLC-epsilon-1, PLCE1, KIAA1516, PLCE, PPLC)Iroquois-class homeodomain protein IRX-2 (Homeodomain protein IRXA2, Iroquois homeobox protein 2, IRX2, IRXA2)Glucosylceramidase (Acid beta-glucosidase, Alglucerase, Beta-glucocerebrosidase, Beta-GC, D-glucosyl-N-acylsphingosine glucohydrolase, Imiglucerase, GBA, GC, GLUC)Kelch-like protein 41 (Kel-like protein 23, Kelch repeat and BTB domain-containing protein 10, Kelch-related protein 1, Sarcosin, KLHL41, KBTBD10, KRP1)Beta-crystallin A2 (Beta-A2 crystallin, CRYBA2)Transmembrane 4 L6 family member 4 (Intestine and liver tetraspan membrane protein, IL-TMP, TM4SF4, ILTMP)Regulator of G-protein signaling 4 (RGP4, RGS4)Protein FEV (Fifth Ewing variant protein, PC12 ETS domain-containing transcription factor 1, PC12 ETS factor 1, Pet-1, FEV, PET1)Homeobox protein ARX (Aristaless-related homeobox, ARX)Prostaglandin E2 receptor EP3 subtype (PGE receptor EP3 subtype, PGE2 receptor EP3 subtype, PGE2-R, Prostanoid EP3 receptor, PTGER3)High mobility group protein B3 (High mobility group protein 2a, HMG-2a, High mobility group protein 4, HMG-4, HMGB3, HMG2A, HMG4)DNA-binding protein RFX6 (Regulatory factor X 6, Regulatory factor X domain-containing protein 1, RFX6, RFXDC1)Transcription factor MafB (Maf-B, V-maf musculoaponeurotic fibrosarcoma oncogene homolog B, MAFB, KRML)Probable global transcription activator SNF2L1 (ATP-dependent helicase SMARCA1, Nucleosome-remodeling factor subunit SNF2L, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1, SMARCA1, SNF2L, SNF2L1)Progesterone receptor (PR, Nuclear receptor subfamily 3 group C member 3, PGR, NR3C3)LIM domain-binding protein 2 (LDB-2, Carboxyl-terminal LIM domain-binding protein 1, CLIM-1, LIM domain-binding factor CLIM1, LDB2, CLIM1)
Marker Molecule:typePeptide hormonePeptide hormoneProteinProteinGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGeneGene
Marker Molecule:categorySecretedSecretedTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factorTranscription factor
Subcellular LocalizationEndprasmic reticulumEndprasmic reticulumNucleusCytosol, SecretedSecretedPlasma membrane, CytosolNucleus Lysosome membrane Plasma membrane, CytosolPlasma membraneNucleus Nucleus Plasma membraneNucleus, CytosolNucleusNucleusNucleusNucleus, CytosolNucleus
Uniprot IdP01275P01275Q99626P02766Q96JB6Q9P212Q9BZI1P04062O60662P53672P48230P49798Q99581Q96QS3P43115O15347Q8HWS3Q9Y5Q3P28370P06401O43679
Gene Id7276841715119615357226291032414127104599954738170302573331492225469935659452419079
Source OrganismHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHumanHuman
ReferencePMID:27182095PMID:16461897PMID:22974359PMID:26691212PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023PMID:27693023

Image

SHOGoiN Cell Id3110001010000000000000-0203110001010000000000000-0203110001010000000000000-020
Image Id

390

391

392

TissuePancreasPancreasPancreas
Cell TypeAlpha cellAlpha cellAlpha cell
OrganismHumanHumanHuman
Cell Strain
LocationPancreasPancreasPancreas
Karyotype
RaceJapaneseJapaneseJapanese
Age575757
Sexmalemalemale
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Diseasemalignant pleural mesothelioma malignant pleural mesothelioma malignant pleural mesothelioma
Cod
Shooting Date2010.12.102010.12.102010.12.10
Shooting Conditionnormal tissue or mild fibrosingnormal tissue or mild fibrosingnormal tissue or mild fibrosing
Embeddingparaffinparaffinparaffin
Staininghematoxylinhematoxylinhematoxylin
MicroscopeOLYMPUS BX50OLYMPUS BX50OLYMPUS BX50
CameraOLYMPUS DP20OLYMPUS DP20OLYMPUS DP20
Image Size X160016001600
Image Size Y120012001200
Resolution727272
Magnification400400400
Contact PersonKoji YamanegiKoji YamanegiKoji Yamanegi
Emailyamanegi@hyo-med.ac.jp yamanegi@hyo-med.ac.jp yamanegi@hyo-med.ac.jp
Telephone0798-45-64320798-45-64320798-45-6432
Fax0798-45-64310798-45-64310798-45-6431
AffiliationDepartment of clinical pathology, Hyogo collage of medicineDepartment of clinical pathology, Hyogo collage of medicineDepartment of clinical pathology, Hyogo collage of medicine
Zip Code663-8501663-8501663-8501
Address1-1, Mukogawa, Nishinomiya, Hyogo1-1, Mukogawa, Nishinomiya, Hyogo1-1, Mukogawa, Nishinomiya, Hyogo
CountryJapanJapanJapan
Note
Nucleous Area
Nucleous Circularity
Nucleous Bending
Nucleous Convex Area
Nucleous Ellipse Long Axis
Nucleous Inertia
Cell Area
Cell Circularity
Cell Bending
Cell Convex Area
Cell Ellipse Long Axis
Cell Inertia
Cell-nucleous Area Ratio
Cell-nucleous Eccentricity1
Cell-nucleous Eccentricity2
Cell-nucleous Eccentricity3
Cell-nucleous Eccentricity4