Image : Cell Image ID 246

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1040402010000000000000-228

246

Salivary gland:Serous cell:Human

Location	Salivary gland
Age	71
Sex	male
Race	Japanese
Disease	submaxilla gingival cancer
Cause Of Death	-
Date	2010.3.19
Condition	normal tissue

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	2997.5	834	Area ratio	0.278232
Circularity	0.452141	0.902863	Eccentricity1	0.0539425
Convex area	3511	892	Eccentricity2	0.0374325
Bending energy	3.46058	2.02174	Eccentricity3	0.0890753
Elliptic long axis	75.5607	33.5026	Eccentricity3	0.0890753
Inertia moment	1628860	111200	Eccentricity4	0.0844242

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	3 Endodermal	4 Terminally differentiated	6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult	1040402010000000000000	228	Head	Mouth	Salivary gland	Submandibular gland	Secretory portion							Serous cell		CL:0000313		236, 237, 238, 239, 240, 241, 242, 243, 245, 246, 247, 248, 249	t049, t050

Image

SHOGoiN Cell Id	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228	1040402010000000000000-228
Image Id	236	237	238	239	240	241	242	243	245	246	247	248	249
Tissue	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland
Cell Type	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell	Serous cell
Organism	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human
Cell Strain
Location	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland	Salivary gland
Karyotype
Race	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese
Age	71	71	71	71	71	71	71	71	71	71	71	71	71
Sex	male	male	male	male	male	male	male	male	male	male	male	male	male
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer
Cod
Shooting Date	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19	2010.3.19
Shooting Condition	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue	normal tissue
Embedding	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200
Resolution	72	72	72	72	72	72	72	72	72	72	72	72	72
Magnification	400	400	400	400	400	400	400	400	400	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan
Note
Nucleous Area	680.5	722.5	757	861	465.5	869	595.5	804.5	897	834	933.5	781	804
Nucleous Circularity	0.872292	0.881329	0.878102	0.84353	0.873359	0.869259	0.808889	0.872555	0.889548	0.902863	0.805626	0.911945	0.897787
Nucleous Bending	2.13793	2.16092	0.422222	1	1.21739	1.46939	1.17647	1.64045	0.979167	2.02174	2.26168	0.954545	1.45652
Nucleous Convex Area	735	780	812	925	509	931	656	862	959	892	1007	835	861
Nucleous Ellipse Long Axis	32.9365	30.8825	32.6085	39.8988	26.1468	36.5432	32.6616	35.0505	36.0571	33.5026	44.9184	32.5003	33.7821
Nucleous Inertia	76096.6	83741.8	92860.1	126556	35232.7	123561	60219.1	105239	129955	111200	158637	97581.7	104266
Cell Area	2253	7615	7443.5	5040.5	6829.5	4207.5	3869.5	3775.5	3019.5	2997.5	4871.5	3533.5	3542
Cell Circularity	0.507006	0.553144	0.472048	0.443229	0.526108	0.428522	0.473156	0.434527	0.487536	0.452141	0.468692	0.460168	0.505501
Cell Bending	2.83333	3.49425	3.15903	2.10224	3.78426	2.84848	2.19011	3.88448	2.0515	3.46058	2.0132	3.10266	3.11111
Cell Convex Area	2652	8468	8515	5971	7683	4945	4638	4465	3616	3511	5748	4247	4098
Cell Ellipse Long Axis	55.1038	109.399	114.27	91.3842	111.186	80.0265	74.9487	84.4325	67.5189	75.5607	93.9276	80.6248	76.2315
Cell Inertia	823032	9695010	9616310	4331330	8142220	2906000	2757770	2529150	1606580	1628860	4278970	2271150	2105850
Cell-nucleous Area Ratio	0.302042	0.0948785	0.101699	0.170816	0.0681602	0.206536	0.153896	0.213084	0.297069	0.278232	0.191625	0.221027	0.22699
Cell-nucleous Eccentricity1	0.0570137	0.323352	0.390742	0.0803249	0.427623	0.118349	0.158238	0.159227	0.0367416	0.0539425	0.17635	0.131808	0.173401
Cell-nucleous Eccentricity2	0.0544428	0.265715	0.289716	0.063807	0.307639	0.100745	0.150953	0.11236	0.0331177	0.0374325	0.129957	0.0944594	0.139446
Cell-nucleous Eccentricity3	0.113844	0.970848	1.11472	0.21177	1.49615	0.265443	0.484292	0.322041	0.0703204	0.0890753	0.459944	0.247941	0.349523
Cell-nucleous Eccentricity4	0.0910843	0.941275	1.01525	0.146143	1.3082	0.220623	0.346392	0.270662	0.0620146	0.0844242	0.27175	0.234329	0.314668