Image : Cell Image ID 246
No. | SHOGoiN cell id | Image (Image ID) | Title | Sample | Method | Contact | Morphologic Feature | Note | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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1 | 1040402010000000000000-228 | 246 | Salivary gland:Serous cell:Human |
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SHOGoiN Cell Taxonomy
Homo sapiens & Mus musculus cell
No. | Germ Layer | Differentiation State | Source Age | Anatomy Id | Cell Type Id | Anatomy:body Part | Anatomy:organ | Anatomy:sub-organ | Anatomy:tissue 1 | Anatomy:tissue 2 | Anatomy:tissue 3 | Anatomy:tissue 4 | Anatomy:tissue 5-1 | Anatomy:tissue 5-2 | Anatomy:tissue 5-3 | Anatomy:tissue 5-4 | Cell Type | Synonym | CL Id | UBERON Id | Image Id | Tissue Image ID |
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1 | 3 Endodermal | 4 Terminally differentiated | 6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult | 1040402010000000000000 | 228 | Head | Mouth | Salivary gland | Submandibular gland | Secretory portion | Serous cell | CL:0000313 | 236, 237, 238, 239, 240, 241, 242, 243, 245, 246, 247, 248, 249 | t049, t050 |
Image
SHOGoiN Cell Id | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 | 1040402010000000000000-228 |
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Image Id | 236 | 237 | 238 | 239 | 240 | 241 | 242 | 243 | 245 | 246 | 247 | 248 | 249 |
Tissue | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland |
Cell Type | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell | Serous cell |
Organism | Human | Human | Human | Human | Human | Human | Human | Human | Human | Human | Human | Human | Human |
Cell Strain | |||||||||||||
Location | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland | Salivary gland |
Karyotype | |||||||||||||
Race | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese | Japanese |
Age | 71 | 71 | 71 | 71 | 71 | 71 | 71 | 71 | 71 | 71 | 71 | 71 | 71 |
Sex | male | male | male | male | male | male | male | male | male | male | male | male | male |
Medium | |||||||||||||
Serum | |||||||||||||
Other Chemical | |||||||||||||
Feeder | |||||||||||||
Other Treatment | |||||||||||||
Culture Period | |||||||||||||
Differentiaion | |||||||||||||
Self Renewal Ability | |||||||||||||
Onocogenic Transformation | |||||||||||||
Knock Out Gene | |||||||||||||
Knock In Gene | |||||||||||||
Disease | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer | submaxilla gingival cancer |
Cod | |||||||||||||
Shooting Date | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 | 2010.3.19 |
Shooting Condition | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue | normal tissue |
Embedding | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin | Paraffin |
Staining | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin | Hematoxylin |
Microscope | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 | OLYMPUS DX50 |
Camera | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 | OLYMPUS DP20 |
Image Size X | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 | 1600 |
Image Size Y | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 | 1200 |
Resolution | 72 | 72 | 72 | 72 | 72 | 72 | 72 | 72 | 72 | 72 | 72 | 72 | 72 |
Magnification | 400 | 400 | 400 | 400 | 400 | 400 | 400 | 400 | 400 | 400 | 400 | 400 | 400 |
Contact Person | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi |
yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | |
Telephone | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 |
Fax | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 |
Affiliation | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine |
Zip Code | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 | 663-8501 |
Address | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo |
Country | Japan | Japan | Japan | Japan | Japan | Japan | Japan | Japan | Japan | Japan | Japan | Japan | Japan |
Note | |||||||||||||
Nucleous Area | 680.5 | 722.5 | 757 | 861 | 465.5 | 869 | 595.5 | 804.5 | 897 | 834 | 933.5 | 781 | 804 |
Nucleous Circularity | 0.872292 | 0.881329 | 0.878102 | 0.84353 | 0.873359 | 0.869259 | 0.808889 | 0.872555 | 0.889548 | 0.902863 | 0.805626 | 0.911945 | 0.897787 |
Nucleous Bending | 2.13793 | 2.16092 | 0.422222 | 1 | 1.21739 | 1.46939 | 1.17647 | 1.64045 | 0.979167 | 2.02174 | 2.26168 | 0.954545 | 1.45652 |
Nucleous Convex Area | 735 | 780 | 812 | 925 | 509 | 931 | 656 | 862 | 959 | 892 | 1007 | 835 | 861 |
Nucleous Ellipse Long Axis | 32.9365 | 30.8825 | 32.6085 | 39.8988 | 26.1468 | 36.5432 | 32.6616 | 35.0505 | 36.0571 | 33.5026 | 44.9184 | 32.5003 | 33.7821 |
Nucleous Inertia | 76096.6 | 83741.8 | 92860.1 | 126556 | 35232.7 | 123561 | 60219.1 | 105239 | 129955 | 111200 | 158637 | 97581.7 | 104266 |
Cell Area | 2253 | 7615 | 7443.5 | 5040.5 | 6829.5 | 4207.5 | 3869.5 | 3775.5 | 3019.5 | 2997.5 | 4871.5 | 3533.5 | 3542 |
Cell Circularity | 0.507006 | 0.553144 | 0.472048 | 0.443229 | 0.526108 | 0.428522 | 0.473156 | 0.434527 | 0.487536 | 0.452141 | 0.468692 | 0.460168 | 0.505501 |
Cell Bending | 2.83333 | 3.49425 | 3.15903 | 2.10224 | 3.78426 | 2.84848 | 2.19011 | 3.88448 | 2.0515 | 3.46058 | 2.0132 | 3.10266 | 3.11111 |
Cell Convex Area | 2652 | 8468 | 8515 | 5971 | 7683 | 4945 | 4638 | 4465 | 3616 | 3511 | 5748 | 4247 | 4098 |
Cell Ellipse Long Axis | 55.1038 | 109.399 | 114.27 | 91.3842 | 111.186 | 80.0265 | 74.9487 | 84.4325 | 67.5189 | 75.5607 | 93.9276 | 80.6248 | 76.2315 |
Cell Inertia | 823032 | 9695010 | 9616310 | 4331330 | 8142220 | 2906000 | 2757770 | 2529150 | 1606580 | 1628860 | 4278970 | 2271150 | 2105850 |
Cell-nucleous Area Ratio | 0.302042 | 0.0948785 | 0.101699 | 0.170816 | 0.0681602 | 0.206536 | 0.153896 | 0.213084 | 0.297069 | 0.278232 | 0.191625 | 0.221027 | 0.22699 |
Cell-nucleous Eccentricity1 | 0.0570137 | 0.323352 | 0.390742 | 0.0803249 | 0.427623 | 0.118349 | 0.158238 | 0.159227 | 0.0367416 | 0.0539425 | 0.17635 | 0.131808 | 0.173401 |
Cell-nucleous Eccentricity2 | 0.0544428 | 0.265715 | 0.289716 | 0.063807 | 0.307639 | 0.100745 | 0.150953 | 0.11236 | 0.0331177 | 0.0374325 | 0.129957 | 0.0944594 | 0.139446 |
Cell-nucleous Eccentricity3 | 0.113844 | 0.970848 | 1.11472 | 0.21177 | 1.49615 | 0.265443 | 0.484292 | 0.322041 | 0.0703204 | 0.0890753 | 0.459944 | 0.247941 | 0.349523 |
Cell-nucleous Eccentricity4 | 0.0910843 | 0.941275 | 1.01525 | 0.146143 | 1.3082 | 0.220623 | 0.346392 | 0.270662 | 0.0620146 | 0.0844242 | 0.27175 | 0.234329 | 0.314668 |