Image : Cell Image ID 251

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1040402030200000000000-090

251

Salivary gland:Epithelial cell:Human

Location	Salivary gland
Age	71
Sex	male
Race	Japanese
Disease	submaxilla gingival cancer
Cause Of Death	-
Date	2010.3.19
Condition	normal tissue

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	4454	813.5	Area ratio	0.182645
Circularity	0.43258	0.884651	Eccentricity1	0.244035
Convex area	5178	875	Eccentricity2	0.105017
Bending energy	1.46452	0.989247	Eccentricity3	0.40752
Elliptic long axis	115.843	34.7005	Eccentricity3	0.40752
Inertia moment	4465510	106940	Eccentricity4	0.350586

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	3 Endodermal	4 Terminally differentiated	6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult	1040402030200000000000	090	Head	Mouth	Salivary gland	Submandibular gland	Submandibular duct	Intralobular duct						Duct epithelial cell		CL:0000068		250, 251, 252	t051

Image

SHOGoiN Cell Id	1040402030200000000000-090	1040402030200000000000-090	1040402030200000000000-090
Image Id	250	251	252
Tissue	Salivary gland	Salivary gland	Salivary gland
Cell Type	Epithelial cell	Epithelial cell	Epithelial cell
Organism	Human	Human	Human
Cell Strain
Location	Salivary gland	Salivary gland	Salivary gland
Karyotype
Race	Japanese	Japanese	Japanese
Age	71	71	71
Sex	male	male	male
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	submaxilla gingival cancer	submaxilla gingival cancer	submaxilla gingival cancer
Cod
Shooting Date	2010.3.19	2010.3.19	2010.3.19
Shooting Condition	normal tissue	normal tissue	normal tissue
Embedding	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600
Image Size Y	1200	1200	1200
Resolution	72	72	72
Magnification	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan
Note
Nucleous Area	814	813.5	705.5
Nucleous Circularity	0.889204	0.884651	0.866441
Nucleous Bending	1.89362	0.989247	3.38824
Nucleous Convex Area	871	875	764
Nucleous Ellipse Long Axis	33.8972	34.7005	32.0321
Nucleous Inertia	107276	106940	80781.6
Cell Area	3927	4454	5898.5
Cell Circularity	0.356896	0.43258	0.47575
Cell Bending	3.03145	1.46452	3.45345
Cell Convex Area	5035	5178	6771
Cell Ellipse Long Axis	96.7993	115.843	99.503
Cell Inertia	3327990	4465510	5945180
Cell-nucleous Area Ratio	0.207283	0.182645	0.119607
Cell-nucleous Eccentricity1	0.0922218	0.244035	0.0868683
Cell-nucleous Eccentricity2	0.0526762	0.105017	0.0674171
Cell-nucleous Eccentricity3	0.165674	0.40752	0.237371
Cell-nucleous Eccentricity4	0.150426	0.350586	0.209421