Image : Cell Image ID 296

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1040001010000010000000-028

296

Mouth:Basal cell:Human

Location	Mouth
Age	72
Sex	male
Race	Japanese
Disease	torous lesion
Cause Of Death	-
Date	2010.12.10
Condition	normal tissue or mild epithelial hyperplasia

Embedding Mehtod
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	1862	500.5	Area ratio	0.268797
Circularity	0.4262	0.618145	Eccentricity1	0.141714
Convex area	2376	563	Eccentricity2	0.073808
Bending energy	2.13861	0.817204	Eccentricity3	0.357497
Elliptic long axis	69.0849	45.6395	Eccentricity3	0.357497
Inertia moment	719366	69741	Eccentricity4	0.111724

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	2 Ecotodermal	4 Terminally differentiated	6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult	1040001010000010000000	028	Head	Mouth		Gingiva	Oral mucosa			Epithelium				Basal cell		CL:0000646		296, 297, 298, 299

Image

SHOGoiN Cell Id	1040001010000010000000-028	1040001010000010000000-028	1040001010000010000000-028	1040001010000010000000-028
Image Id	296	297	298	299
Tissue	Mouth	Mouth	Mouth	Mouth
Cell Type	Basal cell	Basal cell	Basal cell	Basal cell
Organism	Human	Human	Human	Human
Cell Strain
Location	Mouth	Mouth	Mouth	Mouth
Karyotype
Race	Japanese	Japanese	Japanese	Japanese
Age	72	72	72	72
Sex	male	male	male	male
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	torous lesion	torous lesion	torous lesion	torous lesion
Cod
Shooting Date	2010.12.10	2010.12.10	2010.12.10	2010.12.10
Shooting Condition	normal tissue or mild epithelial hyperplasia	normal tissue or mild epithelial hyperplasia	normal tissue or mild epithelial hyperplasia	normal tissue or mild epithelial hyperplasia
Embedding
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200
Resolution	72	72	72	72
Magnification	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan
Note
Nucleous Area	500.5	471	643.5	832
Nucleous Circularity	0.618145	0.830377	0.8225	0.787075
Nucleous Bending	0.817204	3.05556	2.19277	0.901961
Nucleous Convex Area	563	518	696	902
Nucleous Ellipse Long Axis	45.6395	31.3391	36.8317	44.7258
Nucleous Inertia	69741	39972.6	75322.4	133202
Cell Area	1862	1611	3248	2641.5
Cell Circularity	0.4262	0.449981	0.503437	0.488962
Cell Bending	2.13861	2.36782	2.10833	2.12335
Cell Convex Area	2376	1992	3973	3060
Cell Ellipse Long Axis	69.0849	60.1498	95.7677	78.2001
Cell Inertia	719366	526117	2510290	1345930
Cell-nucleous Area Ratio	0.268797	0.292365	0.198122	0.314973
Cell-nucleous Eccentricity1	0.141714	0.062522	0.0709276	0.0909646
Cell-nucleous Eccentricity2	0.073808	0.037175	0.0330203	0.0511508
Cell-nucleous Eccentricity3	0.357497	0.116192	0.141236	0.168506
Cell-nucleous Eccentricity4	0.111724	0.0713507	0.0858576	0.0894338