Image : Cell Image ID 403

No. SHOGoiN cell id Image (Image ID) Title Sample Method Contact Morphologic Feature Note
10000000-002

403

Immune system (blood):Basophil:Human
LocationLarge intestine
Age68
Sexmale
RaceJapanese
Diseaseappendicitis
Cause Of Death-
Date2011.4.8
Conditionnormal or mild epithelium hyperplasia
Embedding Mehtodparaffin
Staining Mehtodhematoxylin
MicroscopeOLYMPUS BX50
CameraOLYMPUS DP20
Image Size (pixels)1200x1600
Resolution (ppi)72
magnification400
PersonKoji Yamanegi
E-mailyamanegi@hyo-med.ac.jp
Telephone0798-45-6432
Fax0798-45-6431
AffiliationDepartment of clinical pathology, Hyogo collage of medicine
Address1-1, Mukogawa, Nishinomiya, Hyogo
  Cell Nucleus   Nucleus/Cell
Area 456.5 149.5 Area ratio 0.327492
Circularity 0.603483 0.813985 Eccentricity1 0.0922465
Convex area 177 Eccentricity2 0.0713279
Bending energy 2.6988 2 Eccentricity3 0.152032
Elliptic long axis 28.0395 14.682 Eccentricity3 0.152032
Inertia moment 36427 3668.41 Eccentricity4 0.136221

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

No.Germ LayerDifferentiation StateSource AgeAnatomy IdCell Type IdAnatomy:level 1Anatomy:level 2Anatomy:level 3Anatomy:level 4-1Anatomy:level 4-2Anatomy:level 5-1Anatomy:level 5-2Anatomy:level 5-3Anatomy:level 6Cell TypeSynonymCL IdUBERON IdImage IdTissue Image ID
14:Mesodermal4:Terminally differentiated6:Fetus 7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult0000000002Immune system classBloodBasophilCL:0000767403

SHOGoiN Cell Marker

Cell Type NameImmune system/blood cell
Cell Type SubclassBasophil
SHOGoiN Cell Id0000000-002
Anatomical LocationBone marrow
Marker Molecule:nameInterleukin-3 receptor subunit alpha (IL-3R alpha, CD123)
Marker Molecule:typeProtein
Marker Molecule:categoryCD molecule
Subcellular LocalizationPlasma membrane
Uniprot IdP26951
Gene Id
Source OrganismHuman
Referencehttp://www.miltenyibiotec.com/en/products-and-services/macs-cell-separation/cell-separation-reagents/dendritic-cells/cd123-microbeads-human.aspx

Image

SHOGoiN Cell Id0000000-002
Image Id

403

TissueImmune system (blood)
Cell TypeBasophil
OrganismHuman
Cell Strain
LocationLarge intestine
Karyotype
RaceJapanese
Age68
Sexmale
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Diseaseappendicitis
Cod
Shooting Date2011.4.8
Shooting Conditionnormal or mild epithelium hyperplasia
Embeddingparaffin
Staininghematoxylin
MicroscopeOLYMPUS BX50
CameraOLYMPUS DP20
Image Size X1600
Image Size Y1200
Resolution72
Magnification400
Contact PersonKoji Yamanegi
Emailyamanegi@hyo-med.ac.jp
Telephone0798-45-6432
Fax0798-45-6431
AffiliationDepartment of clinical pathology, Hyogo collage of medicine
Zip Code663-8501
Address1-1, Mukogawa, Nishinomiya, Hyogo
CountryJapan
Note
Nucleous Area149.5
Nucleous Circularity0.813985
Nucleous Bending2
Nucleous Convex Area177
Nucleous Ellipse Long Axis14.682
Nucleous Inertia3668.41
Cell Area456.5
Cell Circularity0.603483
Cell Bending2.6988
Cell Convex Area
Cell Ellipse Long Axis28.0395
Cell Inertia36427
Cell-nucleous Area Ratio0.327492
Cell-nucleous Eccentricity10.0922465
Cell-nucleous Eccentricity20.0713279
Cell-nucleous Eccentricity30.152032
Cell-nucleous Eccentricity40.136221