Image : Cell Image ID 488
No. | SHOGoiN cell id | Image (Image ID) | Title | Sample | Method | Contact | Morphologic Feature | Note | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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1 | 8010000000000000000000-010 | 488 | Immune system (blood):Mast cell:Human |
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SHOGoiN Cell Taxonomy
Homo sapiens & Mus musculus cell
No. | Germ Layer | Differentiation State | Source Age | Anatomy Id | Cell Type Id | Anatomy:body Part | Anatomy:organ | Anatomy:sub-organ | Anatomy:tissue 1 | Anatomy:tissue 2 | Anatomy:tissue 3 | Anatomy:tissue 4 | Anatomy:tissue 5-1 | Anatomy:tissue 5-2 | Anatomy:tissue 5-3 | Anatomy:tissue 5-4 | Cell Type | Synonym | CL Id | UBERON Id | Image Id | Tissue Image ID |
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1 | 4:Mesodermal | 4:Terminally differentiated | 6:Fetus 7:Postnatal 8:Neonatal 9:Infant 10:Juvenile 11:Adult | 8010000000000000000000 | 010 | Immune system class | Blood | Mast cell | CL:0000097 | 32, 488, 489 |
Image
SHOGoiN Cell Id | 8010000000000000000000-010 | 8010000000000000000000-010 | 8010000000000000000000-010 |
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Image Id | 32 | 488 | 489 |
Tissue | Immune system (blood) | Immune system (blood) | Immune system (blood) |
Cell Type | Mast cell | Mast cell | Mast cell |
Organism | Human | Human | Human |
Cell Strain | |||
Location | Large intestine | Pharynx | Pharynx |
Karyotype | |||
Race | Japanese | Japanese | Japanese |
Age | 60 | 81 | 81 |
Sex | Male | male | male |
Medium | |||
Serum | |||
Other Chemical | |||
Feeder | |||
Other Treatment | |||
Culture Period | |||
Differentiaion | |||
Self Renewal Ability | |||
Onocogenic Transformation | |||
Knock Out Gene | |||
Knock In Gene | |||
Disease | cancer of sigmoid colon | squamous cell carcinoma | squamous cell carcinoma |
Cod | |||
Shooting Date | 2008.7.31 | 2011.9.22 | 2011.9.22 |
Shooting Condition | normal tissue from sigmoid colon | normal or mild epithelium hyperplasia | normal or mild epithelium hyperplasia |
Embedding | Paraffin | paraffin | paraffin |
Staining | Hematoxylin | hematoxylin | hematoxylin |
Microscope | OLYMPUS DX51 | OLYMPUS BX50 | OLYMPUS BX50 |
Camera | OLYMPUS DP21 | OLYMPUS DP20 | OLYMPUS DP20 |
Image Size X | 1600 | 1600 | 1600 |
Image Size Y | 1200 | 1200 | 1200 |
Resolution | 72 | 72 | 72 |
Magnification | 400 | 400 | 400 |
Contact Person | Koji Yamanegi | Koji Yamanegi | Koji Yamanegi |
yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | yamanegi@hyo-med.ac.jp | |
Telephone | 0798-45-6432 | 0798-45-6432 | 0798-45-6432 |
Fax | 0798-45-6431 | 0798-45-6431 | 0798-45-6431 |
Affiliation | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine | Department of clinical pathology, Hyogo collage of medicine |
Zip Code | 663-8501 | 663-8501 | 663-8501 |
Address | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo | 1-1, Mukogawa, Nishinomiya, Hyogo |
Country | Japan | Japan | Japan |
Note | |||
Nucleous Area | 166.5 | 217.5 | 278.5 |
Nucleous Circularity | 0.89 | 0.84509 | 0.862537 |
Nucleous Bending | 192 | 1.55102 | 3.16364 |
Nucleous Convex Area | 4444.44 | 250 | 313 |
Nucleous Ellipse Long Axis | 14.7 | 19.2603 | 20.8697 |
Nucleous Inertia | 1.58 | 7897.75 | 12713.6 |
Cell Area | 2079.5 | 412 | 350.5 |
Cell Circularity | 0.47 | 0.718081 | 0.800352 |
Cell Bending | 3.15 | 2.28571 | 2.19048 |
Cell Convex Area | 2507 | ||
Cell Ellipse Long Axis | 62.37 | 25.9579 | 22.8345 |
Cell Inertia | 773668 | 28204.8 | 20007.4 |
Cell-nucleous Area Ratio | 0.08 | 0.527913 | 0.794579 |
Cell-nucleous Eccentricity1 | 0.43 | 0.0485106 | 0 |
Cell-nucleous Eccentricity2 | 0.3 | 0.0385239 | 0 |
Cell-nucleous Eccentricity3 | 1.31 | 0.0692443 | 0 |
Cell-nucleous Eccentricity4 | 1.29 | 0.0519202 | 0 |