Image : Cell Image ID 832

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1030005040300000000000-175

832

Eyeball:Melanocyte:Human

Location	Eyeball
Age	65
Sex	Female
Race	Japanese
Disease	Orbital sebaceous carcinoma
Cause Of Death	-
Date	2014.02.24
Condition

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	380.5	2252.5	Area ratio	5.91984
Circularity	0.73477	0.32125	Eccentricity1	1.06308
Convex area	423	2792	Eccentricity2	0.501507
Bending energy	0.507463	2.88627	Eccentricity3	0.531481
Elliptic long axis	32.1521	99.3717	Eccentricity3	0.531481
Inertia moment	29963.4	1.58E+06	Eccentricity4	0.162265

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	2 Ectodermal	4 Terminally differentiated	6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult	1030005040300000000000	175	Head	Eye		Eyeball	Uvea (tunica vasculosa bulbi)	Iris						Melanocyte		CL:0000148		811, 812, 813, 814, 815, 816, 817, 830, 831, 832, 833, 834, 851, 852, 853, 854, 855, 856

Image

SHOGoiN Cell Id	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175	1030005040300000000000-175
Image Id	811	812	813	814	815	816	817	830	831	832	833	834	851	852	853	854	855	856
Tissue	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Cell Type	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte	Melanocyte
Organism	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human
Cell Strain
Location	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Karyotype
Race	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese
Age	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65
Sex	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma
Cod
Shooting Date	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24
Shooting Condition
Embedding	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200
Resolution	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72
Magnification	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan
Note
Nucleous Area	2349	1599.5	1022	1118.5	4612.5	2000	2922.5	2073	1512.5	2252.5	4342.5	1235	3215	1654.5	7872	1336.5	1764	1948.5
Nucleous Circularity	0.38315	0.309023	0.33326	0.346589	0.531963	0.381726	0.243406	0.366142	0.450342	0.32125	0.388513	0.573449	0.373986	0.484106	0.382094	0.36437	0.40734	0.475028
Nucleous Bending	3.06034	1.45205	3.19512	2.64671	3.78182	3.87037	1.63582	2.81081	1.20442	2.88627	1.02786	1.94203	3.61314	2.85876	2.55556	1.57062	2.82653	3.31937
Nucleous Convex Area	3053	2063	1283	1442	5205	2543	3866	2620	1824	2792	5071	1401	4015	2038	10443	1574	2404	2392
Nucleous Ellipse Long Axis	66.8944	89.9502	75.1003	67.1633	108.171	84.3867	130.067	70.5735	71.2129	99.3717	126.744	54.9751	86.2717	67.1817	146.605	85.8992	53.0819	57.9042
Nucleous Inertia	1.07E+06	924160	401508	413163	4.53E+06	1.09E+06	4.45E+06	889326	580197	1.58E+06	5.02E+06	306432	2.13E+06	609140	1.69E+07	672881	561911	697626
Cell Area	751.5	774.5	390	452.5	1399	1208	398.5	292	310	380.5	243	274.5	195	537	403.5	241.5	372.5	356.5
Cell Circularity	0.728694	0.782893	0.613239	0.859127	0.782579	0.792884	0.613783	0.897497	0.815562	0.73477	0.758357	0.615371	0.857541	0.75683	0.631037	0.828383	0.831904	0.871466
Cell Bending	0.49505	1.01031	1.22222	0.507042	4.24615	2.15517	0.666667	0.444444	0.533333	0.507463	0.535714	0.597015	2.69565	2.85366	1.21127	1.56863	0.539683	0.380952
Cell Convex Area	825	843	437	493	1491	1285	449	324	344	423	277	322	222	589	449	272	408	392
Cell Ellipse Long Axis	42.9319	41.8664	37.2892	26.2907	53.9231	52.55	38.1758	20.2935	24.6575	32.1521	23.0831	30.0385	17.3387	36.6379	37.5973	20.9704	27.1928	25.6817
Cell Inertia	111030	112285	38809.4	33657.8	353079	274061	40535.3	13740	16932.7	29963.4	11204	18252.9	6240.59	56940.6	40323.3	9940.93	24391.1	21766.6
Cell-nucleous Area Ratio	3.12575	2.0652	2.62051	2.47182	3.297	1.65563	7.33375	7.09932	4.87903	5.91984	17.8704	4.49909	16.4872	3.08101	19.5093	5.53416	4.73557	5.46564
Cell-nucleous Eccentricity1	0.284121	0.211102	1.06042	0.387755	0.667184	0.240716	0.167043	0.362894	0.185664	1.06308	0.573268	0.271953	0.832903	0.272718	3.55391	0.732137	0.41023	0.337647
Cell-nucleous Eccentricity2	0.149146	0.119428	0.386766	0.3272	0.409671	0.134559	0.0585729	0.330559	0.121667	0.501507	0.338354	0.105274	0.694493	0.139173	1.33095	0.515807	0.265184	0.233629
Cell-nucleous Eccentricity3	0.128965	0.206673	0.789867	0.386376	0.400398	0.222805	0.0742406	0.170633	0.11039	0.531481	0.177022	0.10951	0.244787	0.15113	0.65749	0.535693	0.159344	0.134021
Cell-nucleous Eccentricity4	0.0957199	0.0555863	0.192039	0.128081	0.20422	0.0837937	0.0171917	0.0950528	0.0421272	0.162265	0.0616222	0.057522	0.139578	0.075899	0.341324	0.125923	0.135849	0.103619