SHOGoiN Cell Methylome: GSM1015969

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015969


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M1Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000018995 Nars2 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) 6.6582 0.0000
2 ENSMUSG00000100027 Gm28477 predicted gene 28477 5.9069 0.0000
3 ENSMUSG00000038594 Cep85l centrosomal protein 85-like 5.6147 0.0000
4 ENSMUSG00000028792 Ak2 adenylate kinase 2 4.7004 0.0000
5 ENSMUSG00000022803 Popdc2 popeye domain containing 2 4.6084 0.0000
6 ENSMUSG00000098178 Gm42418 predicted gene, 42418 4.5795 0.0000
7 ENSMUSG00000082652 Gm14725 predicted gene 14725 4.4594 0.0000
8 ENSMUSG00000027438 Napb N-ethylmaleimide sensitive fusion protein attachment protein beta 4.3219 0.0000
9 ENSMUSG00000105151 Gm43241 predicted gene 43241 4.2479 0.0000
10 ENSMUSG00000107681 4930528H21Rik RIKEN cDNA 4930528H21 gene 4.2479 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000040648 Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 -3.0875 0.0003
51075 ENSMUSG00000026333 Gin1 gypsy retrotransposon integrase 1 -3.0875 0.0003
51074 ENSMUSG00000107894 Gm10388 predicted gene 10388 -3.0000 0.0156
51073 ENSMUSG00000105146 Gm35409 predicted gene, 35409 -3.0000 0.0005
51072 ENSMUSG00000098642 Gm27977 predicted gene, 27977 -3.0000 0.0156
51071 ENSMUSG00000089039 Gm22165 predicted gene, 22165 -3.0000 0.0156
51070 ENSMUSG00000086265 Marcksl1-ps4 MARCKS-like 1, pseudogene 4 -3.0000 0.0156
51069 ENSMUSG00000083723 Rpl23a-ps14 ribosomal protein L23A, pseudogene 14 -3.0000 0.0156
51068 ENSMUSG00000080799 Gm15166 predicted gene 15166 -3.0000 0.0156
51067 ENSMUSG00000057290 Gm15732 predicted gene 15732 -3.0000 0.0156

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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