SHOGoiN Cell Methylome: GSM1015970

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015970


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M2Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000022951 Rcan1 regulator of calcineurin 1 10.6147 0.0000
2 ENSMUSG00000031201 Brcc3 BRCA1/BRCA2-containing complex, subunit 3 6.7814 0.0000
3 ENSMUSG00000069785 Gm11444 predicted gene 11444 6.7279 0.0000
4 ENSMUSG00000026278 Bok BCL2-related ovarian killer 6.6273 0.0000
5 ENSMUSG00000001349 Cnn1 calponin 1 6.2738 0.0000
6 ENSMUSG00000103194 Gm37643 predicted gene, 37643 6.2577 0.0000
7 ENSMUSG00000098137 Gm33962 predicted gene, 33962 6.1085 0.0000
8 ENSMUSG00000039989 Cbx4 chromobox 4 6.0444 0.0000
9 ENSMUSG00000097614 Gm26508 predicted gene, 26508 6.0444 0.0000
10 ENSMUSG00000062105 Olfr183 olfactory receptor 183 5.8071 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000107894 Gm10388 predicted gene 10388 -2.7459 0.0000
51075 ENSMUSG00000107062 Gm43580 predicted gene 43580 -2.7004 0.0002
51074 ENSMUSG00000081339 Gm16044 predicted gene 16044 -2.7004 0.0002
51073 ENSMUSG00000042105 Inpp5f inositol polyphosphate-5-phosphatase F -2.7004 0.0002
51072 ENSMUSG00000110213 Gm45628 predicted gene 45628 -2.5850 0.0111
51071 ENSMUSG00000108692 Gm45034 predicted gene 45034 -2.5850 0.0111
51070 ENSMUSG00000106024 A530083M17Rik RIKEN cDNA A530083M17 gene -2.5850 0.0111
51069 ENSMUSG00000102657 Gm37899 predicted gene, 37899 -2.5850 0.0111
51068 ENSMUSG00000099114 Gm27405 predicted gene, 27405 -2.5850 0.0111
51067 ENSMUSG00000097221 1810049J17Rik RIKEN cDNA 1810049J17 gene -2.5850 0.0111

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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