SHOGoiN Cell Methylome: GSM1015971

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015971


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M3Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000035133 Arhgap5 Rho GTPase activating protein 5 7.4009 0.0000
2 ENSMUSG00000095477 Gm25076 predicted gene, 25076 7.3750 0.0000
3 ENSMUSG00000022951 Rcan1 regulator of calcineurin 1 6.9542 0.0000
4 ENSMUSG00000054662 Ano9 anoctamin 9 6.2288 0.0000
5 ENSMUSG00000066877 Nck2 non-catalytic region of tyrosine kinase adaptor protein 2 6.0661 0.0000
6 ENSMUSG00000028857 Tmem222 transmembrane protein 222 5.9773 0.0000
7 ENSMUSG00000083241 Gm13259 predicted gene 13259 5.9773 0.0000
8 ENSMUSG00000052426 Gm9877 predicted gene 9877 5.7549 0.0000
9 ENSMUSG00000032333 Stoml1 stomatin-like 1 5.6147 0.0000
10 ENSMUSG00000036986 Pml promyelocytic leukemia 5.6147 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000089591 Gm24352 predicted gene, 24352 -3.1699 0.0015
51075 ENSMUSG00000084599 n-R5s70 nuclear encoded rRNA 5S 70 -3.1699 0.0015
51074 ENSMUSG00000082143 Gm12864 predicted gene 12864 -3.1699 0.0015
51073 ENSMUSG00000059741 Myl3 myosin, light polypeptide 3 -3.1699 0.0015
51072 ENSMUSG00000058793 Cds2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 -3.1699 0.0015
51071 ENSMUSG00000025202 Scd3 stearoyl-coenzyme A desaturase 3 -3.1699 0.0015
51070 ENSMUSG00000022200 Golph3 golgi phosphoprotein 3 -3.1699 0.0000
51069 ENSMUSG00000044176 Spink10 serine peptidase inhibitor, Kazal type 10 -3.0875 0.0000
51068 ENSMUSG00000032572 Col6a4 collagen, type VI, alpha 4 -3.0850 0.0000
51067 ENSMUSG00000106483 Gm32736 predicted gene, 32736 -3.0437 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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