SHOGoiN Cell Methylome: GSM1147580

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147580


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9060100-715Sequence Read ArchiveSRP023116SRP023116_M1Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000064763 Gm23515 predicted gene, 23515 9.0821 0.0000
2 ENSMUSG00000099069 Mir8090 microRNA 8090 9.0768 0.0000
3 ENSMUSG00000074595 Wfdc6a WAP four-disulfide core domain 6A 8.6770 0.0000
4 ENSMUSG00000077257 Gm26080 predicted gene, 26080 8.4686 0.0000
5 ENSMUSG00000080542 Gm22710 predicted gene, 22710 8.4686 0.0000
6 ENSMUSG00000107722 2900060B14Rik RIKEN cDNA 2900060B14 gene 8.4686 0.0000
7 ENSMUSG00000066359 Tcl1b1 T cell leukemia/lymphoma 1B, 1 8.2715 0.0000
8 ENSMUSG00000089627 Gm16228 predicted gene 16228 8.2510 0.0000
9 ENSMUSG00000072722 Gm6588 predicted gene 6588 8.1816 0.0000
10 ENSMUSG00000109602 Gm31597 predicted gene, 31597 8.1749 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000035960 Apex1 apurinic/apyrimidinic endonuclease 1 -7.6647 0.0000
51075 ENSMUSG00000006289 Osgep O-sialoglycoprotein endopeptidase -7.6647 0.0000
51074 ENSMUSG00000053768 Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 -7.6582 0.0000
51073 ENSMUSG00000095105 Edaradd EDAR (ectodysplasin-A receptor)-associated death domain -7.6575 0.0000
51072 ENSMUSG00000054720 Lrrc8c leucine rich repeat containing 8 family, member C -7.6503 0.0000
51071 ENSMUSG00000030036 Mogs mannosyl-oligosaccharide glucosidase -7.6405 0.0000
51070 ENSMUSG00000030035 Wbp1 WW domain binding protein 1 -7.6405 0.0000
51069 ENSMUSG00000107497 Gm44957 predicted gene 44957 -7.6375 0.0000
51068 ENSMUSG00000029777 Gars glycyl-tRNA synthetase -7.6361 0.0000
51067 ENSMUSG00000087530 Gm15533 predicted gene 15533 -7.6345 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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