SHOGoiN Cell Methylome: GSM1147582

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147582


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9060100-715Sequence Read ArchiveSRP023116SRP023116_M3Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000082286 Pisd-ps1 phosphatidylserine decarboxylase, pseudogene 1 8.4757 0.0000
2 ENSMUSG00000102862 Gm37640 predicted gene, 37640 8.3129 0.0000
3 ENSMUSG00000112886 NA 7.9542 0.0000
5 ENSMUSG00000098842 Gm27907 predicted gene, 27907 7.6401 0.0000
6 ENSMUSG00000093665 Obox3-ps1 oocyte specific homeobox 3, pseudogene 1 7.4346 0.0000
7 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.3428 0.0000
8 ENSMUSG00000023013 Aqp2 aquaporin 2 7.1997 0.0000
9 ENSMUSG00000077647 Gm24981 predicted gene, 24981 7.1997 0.0000
10 ENSMUSG00000067610 Klri1 killer cell lectin-like receptor family I member 1 7.1898 0.0000
51067 ENSMUSG00000065126 Snord104 small nucleolar RNA, C/D box 104 -6.9307 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000062312 Erbb2 erb-b2 receptor tyrosine kinase 2 -6.9606 0.0000
51075 ENSMUSG00000026443 Lrrn2 leucine rich repeat protein 2, neuronal -6.9570 0.0000
51074 ENSMUSG00000022704 Qtrt2 queuine tRNA-ribosyltransferase accessory subunit 2 -6.9483 0.0000
51073 ENSMUSG00000006154 Eps8l1 EPS8-like 1 -6.9425 0.0010
51072 ENSMUSG00000084458 Mir1907 microRNA 1907 -6.9408 0.0000
51071 ENSMUSG00000028884 Rpa2 replication protein A2 -6.9320 0.0000
51070 ENSMUSG00000105884 Gm22711 predicted gene, 22711 -6.9307 0.0000
51069 ENSMUSG00000086924 Gm11766 predicted gene 11766 -6.9307 0.0009
51068 ENSMUSG00000080540 Gm22711 predicted gene, 22711 -6.9307 0.0000
51067 ENSMUSG00000065126 Snord104 small nucleolar RNA, C/D box 104 -6.9307 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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