SHOGoiN Cell Methylome: GSM1147582

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147582


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7020001000000000000000-715Sequence Read ArchiveSRP023116SRP023116_M3Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000082286 Pisd-ps1 phosphatidylserine decarboxylase, pseudogene 1 8.4757 0.0000
2 ENSMUSG00000102862 Gm37640 predicted gene, 37640 8.3129 0.0000
3 ENSMUSG00000112886 Gm18339 predicted gene, 18339 7.9542 0.0000
5 ENSMUSG00000098842 Gm27907 predicted gene, 27907 7.6401 0.0000
6 ENSMUSG00000093665 Obox3-ps1 oocyte specific homeobox 3, pseudogene 1 7.4346 0.0000
7 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.3428 0.0000
8 ENSMUSG00000023013 Aqp2 Aquaporin-2 7.1997 0.0000
9 ENSMUSG00000077647 Gm24981 predicted gene, 24981 7.1997 0.0000
10 ENSMUSG00000067610 Klri1 Killer cell lectin-like receptor subfamily I member 1 7.1898 0.0000
50989 ENSMUSG00000097360 9430065F17Rik RIKEN cDNA 9430065F17 gene -6.5699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000054162 Spock3 Testican-3 -6.5980 0.0000
50997 ENSMUSG00000032786 Alas1 5-aminolevulinate synthase, nonspecific, mitochondrial -6.5958 0.0000
50996 ENSMUSG00000099397 Gm7809 predicted gene 7809 -6.5947 0.0000
50995 ENSMUSG00000086004 Gm7805 predicted gene 7805 -6.5947 0.0000
50994 ENSMUSG00000101624 Gm28882 predicted gene 28882 -6.5850 0.0045
50993 ENSMUSG00000034303 Ccdc15 Coiled-coil domain-containing protein 15 -6.5850 0.0000
50992 ENSMUSG00000039620 6430573F11Rik Probable tRNA methyltransferase 9-like protein -6.5833 0.0000
50991 ENSMUSG00000034780 B3galt1 Beta-1,3-galactosyltransferase 1 -6.5799 0.0000
50990 ENSMUSG00000063358 Mapk1 Mus musculus mitogen-activated protein kinase 1 (Mapk1), transcript variant 3, mRNA. -6.5735 0.0000
50989 ENSMUSG00000097360 9430065F17Rik RIKEN cDNA 9430065F17 gene -6.5699 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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