SHOGoiN Cell Methylome: GSM1147583

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147583


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7020001000000000000000-715Sequence Read ArchiveSRP023116SRP023116_M4Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000047502 Mroh7 Maestro heat-like repeat-containing protein family member 7 8.8281 0.0000
2 ENSMUSG00000098281 Gm27529 predicted gene, 27529 8.7966 0.0000
3 ENSMUSG00000086039 Gm12227 predicted gene 12227 8.4321 0.0000
4 ENSMUSG00000047861 Foxi1 Forkhead box protein I1 8.4277 0.0000
5 ENSMUSG00000098842 Gm27907 predicted gene, 27907 8.0590 0.0000
6 ENSMUSG00000087950 Mir1948 microRNA 1948 7.9858 0.0000
7 ENSMUSG00000091003 Gm7244 predicted gene 7244 7.9581 0.0000
8 ENSMUSG00000077507 Gm24235 predicted gene, 24235 7.8826 0.0000
9 ENSMUSG00000081152 Gm12430 predicted gene 12430 7.8765 0.0000
10 ENSMUSG00000028280 Gabrr1 Gamma-aminobutyric acid receptor subunit rho-1 7.7748 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000027358 Bmp2 Bone morphotic protein 2 -7.1782 0.0000
50997 ENSMUSG00000069171 Nr2f1 nuclear receptor subfamily 2, group F, member 1 -7.1718 0.0000
50996 ENSMUSG00000093975 Vmn2r-ps19 vomeronasal 2, receptor, pseudogene 19 -7.1599 0.0000
50995 ENSMUSG00000082248 Gm13161 predicted gene 13161 -7.1599 0.0000
50994 ENSMUSG00000051397 Tacstd2 Tumor-associated calcium signal transducer 2 -7.1558 0.0000
50993 ENSMUSG00000032727 Mier3 Mesoderm induction early response protein 3 -7.1449 0.0000
50992 ENSMUSG00000037536 Fbxo34 F-box only protein 34 -7.1431 0.0000
50991 ENSMUSG00000106568 Gm42814 predicted gene 42814 -7.1370 0.0000
50990 ENSMUSG00000050144 Slc25a44 solute carrier family 25, member 44 -7.1370 0.0000
50989 ENSMUSG00000000811 Txnrd3 thioredoxin reductase 3 -7.1216 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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