SHOGoiN Cell Methylome: GSM1147583

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147583


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9060100-715Sequence Read ArchiveSRP023116SRP023116_M4Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000047502 Mroh7 maestro heat-like repeat family member 7 8.8281 0.0000
2 ENSMUSG00000098281 Gm27529 predicted gene, 27529 8.7966 0.0000
3 ENSMUSG00000086039 Gm12227 predicted gene 12227 8.4321 0.0000
4 ENSMUSG00000047861 Foxi1 forkhead box I1 8.4277 0.0000
5 ENSMUSG00000098842 Gm27907 predicted gene, 27907 8.0590 0.0000
6 ENSMUSG00000087950 Mir1948 microRNA 1948 7.9858 0.0000
7 ENSMUSG00000091003 Gm7244 predicted gene 7244 7.9581 0.0000
8 ENSMUSG00000077507 Gm24235 predicted gene, 24235 7.8826 0.0000
9 ENSMUSG00000081152 Gm12430 predicted gene 12430 7.8765 0.0000
10 ENSMUSG00000028280 Gabrr1 gamma-aminobutyric acid (GABA) C receptor, subunit rho 1 7.7748 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000055313 Pgbd1 piggyBac transposable element derived 1 -7.4990 0.0000
51075 ENSMUSG00000108175 Gm16499 predicted gene 16499 -7.4989 0.0000
51074 ENSMUSG00000050541 Adra1b adrenergic receptor, alpha 1b -7.4950 0.0000
51073 ENSMUSG00000035620 Ric8b RIC8 guanine nucleotide exchange factor B -7.4870 0.0000
51072 ENSMUSG00000001999 Blvra biliverdin reductase A -7.4855 0.0000
51071 ENSMUSG00000105361 AY036118 cDNA sequence AY036118 -7.4832 0.0000
51070 ENSMUSG00000041238 Rbbp8 retinoblastoma binding protein 8, endonuclease -7.4808 0.0000
51069 ENSMUSG00000095054 Gm13146 predicted gene 13146 -7.4797 0.0000
51068 ENSMUSG00000098340 Gm27253 predicted gene 27253 -7.4758 0.0000
51067 ENSMUSG00000074918 Inafm2 InaF motif containing 2 -7.4696 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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