SHOGoiN Cell Methylome: GSM1147587

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147587


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9060100-715Sequence Read ArchiveSRP023116SRP023116_M8Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000048188 Gm8181 predicted gene 8181 7.7944 0.0000
2 ENSMUSG00000035246 Pcyt1b phosphate cytidylyltransferase 1, choline, beta isoform 7.6933 0.0000
3 ENSMUSG00000067610 Klri1 killer cell lectin-like receptor family I member 1 7.5078 0.0000
4 ENSMUSG00000020706 Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) 7.4527 0.0000
5 ENSMUSG00000030720 Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 7.2527 0.0000
6 ENSMUSG00000098540 Mir7059 microRNA 7059 7.2527 0.0000
7 ENSMUSG00000078280 Tas2r122 taste receptor, type 2, member 122 7.1699 0.0000
8 ENSMUSG00000079626 Rhox7b reproductive homeobox 7B 7.1466 0.0000
9 ENSMUSG00000085839 Gm15949 predicted gene 15949 7.0589 0.0000
10 ENSMUSG00000070461 9230112E08Rik RIKEN cDNA 9230112E08 gene 7.0423 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000023809 Rps6ka2 ribosomal protein S6 kinase, polypeptide 2 -6.9164 0.0000
51075 ENSMUSG00000061898 Rbak RB-associated KRAB zinc finger -6.9129 0.0000
51074 ENSMUSG00000002228 Ppm1j protein phosphatase 1J -6.9126 0.0000
51073 ENSMUSG00000089000 Gm23853 predicted gene, 23853 -6.9112 0.0000
51072 ENSMUSG00000031953 Tmem170 transmembrane protein 170 -6.9112 0.0000
51071 ENSMUSG00000100313 Gm28323 predicted gene 28323 -6.9037 0.0000
51070 ENSMUSG00000097971 Gm26917 predicted gene, 26917 -6.8988 0.0000
51069 ENSMUSG00000082727 Gm13260 predicted gene 13260 -6.8927 0.0000
51068 ENSMUSG00000037197 Rbm17 RNA binding motif protein 17 -6.8927 0.0000
51067 ENSMUSG00000040570 Rundc3b RUN domain containing 3B -6.8886 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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