SHOGoiN Cell Methylome: GSM1147592

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147592


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6020500-761Sequence Read ArchiveSRP023116SRP023116_M9Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMetaphase II oocyteMouseGenitaliumBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000074378 Bsph1 binder of sperm protein homolog 1 8.4890 0.0000
3 ENSMUSG00000110548 Gm45721 predicted gene 45721 7.5546 0.0000
4 ENSMUSG00000004667 Polr2e polymerase (RNA) II (DNA directed) polypeptide E 7.5328 0.0000
5 ENSMUSG00000103920 Gm37897 predicted gene, 37897 7.5157 0.0000
6 ENSMUSG00000053399 Adamts18 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 7.4468 0.0000
7 ENSMUSG00000109501 Gm14377 predicted gene 14377 7.3923 0.0000
8 ENSMUSG00000110471 Gm45823 predicted gene 45823 7.3576 0.0000
9 ENSMUSG00000111539 NA 7.3106 0.0000
10 ENSMUSG00000047654 Tssk6 testis-specific serine kinase 6 7.3083 0.0000
51067 ENSMUSG00000044400 Sowahd sosondowah ankyrin repeat domain family member D -7.2277 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000084703 Gm22985 predicted gene, 22985 -7.2493 0.0000
51075 ENSMUSG00000060647 Gm7099 predicted gene 7099 -7.2455 0.0000
51074 ENSMUSG00000027007 Ssfa2 sperm specific antigen 2 -7.2449 0.0000
51073 ENSMUSG00000024290 Rock1 Rho-associated coiled-coil containing protein kinase 1 -7.2372 0.0000
51072 ENSMUSG00000068391 Chrac1 chromatin accessibility complex 1 -7.2368 0.0000
51071 ENSMUSG00000100707 Gm28523 predicted gene 28523 -7.2349 0.0000
51070 ENSMUSG00000041741 Pde3a phosphodiesterase 3A, cGMP inhibited -7.2349 0.0000
51069 ENSMUSG00000048439 Nupl2 nucleoporin like 2 -7.2328 0.0000
51068 ENSMUSG00000088685 Gm23995 predicted gene, 23995 -7.2302 0.0000
51067 ENSMUSG00000044400 Sowahd sosondowah ankyrin repeat domain family member D -7.2277 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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