SHOGoiN Cell Methylome: GSM1147592

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147592


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP023116SRP023116_M9Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMetaphase II oocyteMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000074378 Bsph1 Binder of sperm protein homolog 1 8.4890 0.0000
3 ENSMUSG00000110548 Gm45721 predicted gene 45721 7.5546 0.0000
4 ENSMUSG00000004667 Polr2e polymerase (RNA) II (DNA directed) polypeptide E 7.5328 0.0000
5 ENSMUSG00000103920 Gm37897 predicted gene, 37897 7.5157 0.0000
6 ENSMUSG00000053399 Adamts18 A disintegrin and metalloproteinase with thrombospondin motifs 18 7.4468 0.0000
7 ENSMUSG00000109501 Gm14377 predicted gene 14377 7.3923 0.0000
8 ENSMUSG00000110471 Gm45823 predicted gene 45823 7.3576 0.0000
9 ENSMUSG00000111539 Gm48372 predicted gene, 48372 7.3106 0.0000
10 ENSMUSG00000047654 Tssk6 Testis-specific serine/threonine-protein kinase 6 7.3083 0.0000
50989 ENSMUSG00000046470 Sox18 Transcription factor SOX-18 -6.9918 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000076230 Gm22758 predicted gene, 22758 -7.0334 0.0000
50997 ENSMUSG00000061272 Gm14173 predicted gene 14173 -7.0334 0.0000
50996 ENSMUSG00000001819 Hoxd13 Homeobox protein Hox-D13 -7.0302 0.0000
50995 ENSMUSG00000029598 Plbd2 Putative phospholipase B-like 2 Putative phospholipase B-like 2 28 kDa form Putative phospholipase B-like 2 40 kDa form Putative phospholipase B-like 2 15 kDa form -7.0244 0.0000
50994 ENSMUSG00000032330 Cox7a2 Cytochrome c oxidase subunit 7A2, mitochondrial -7.0210 0.0000
50993 ENSMUSG00000003068 Stk11 Serine/threonine-protein kinase STK11 -7.0162 0.0000
50992 ENSMUSG00000014496 Ankrd28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A -7.0011 0.0000
50991 ENSMUSG00000024268 Celf4 CUGBP Elav-like family member 4 -6.9955 0.0000
50990 ENSMUSG00000110508 Gm8940 predicted gene 8940 -6.9943 0.0000
50989 ENSMUSG00000046470 Sox18 Transcription factor SOX-18 -6.9918 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...