SHOGoiN Cell Methylome: GSM1147597

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147597


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M14Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084274 Gm12504 NA 7.9307 0.0000
2 ENSMUSG00000038608 Dock10 dedicator of cytokinesis 10 7.8455 0.0000
3 ENSMUSG00000103192 Gm37645 predicted gene, 37645 7.8455 0.0000
4 ENSMUSG00000020216 Jsrp1 Junctional sarcoplasmic reticulum protein 1 7.8237 0.0000
5 ENSMUSG00000024738 Pga5 Pepsin A-5 7.8009 0.0000
6 ENSMUSG00000109453 4930405G09Rik RIKEN cDNA 4930405G09 gene 7.7616 0.0000
7 ENSMUSG00000108849 Gm35147 predicted gene, 35147 7.5673 0.0000
8 ENSMUSG00000105032 Gm43117 predicted gene 43117 7.5275 0.0000
9 ENSMUSG00000043782 Bicdl2 BICD family-like cargo adapter 2 7.4757 0.0000
10 ENSMUSG00000027380 Acoxl Acyl-coenzyme A oxidase-like protein 7.3750 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000028138 Adh5 Alcohol dehydrogenase class-3 -7.4106 0.0000
50997 ENSMUSG00000106899 1700013A02Rik RIKEN cDNA 1700013A02 gene -7.4089 0.0000
50996 ENSMUSG00000001687 Ubl3 ubiquitin-like 3 -7.4089 0.0000
50995 ENSMUSG00000032415 Ube2cbp ubiquitin-conjugating enzyme E2C binding protein -7.4017 0.0000
50994 ENSMUSG00000001819 Hoxd13 Homeobox protein Hox-D13 -7.4009 0.0000
50993 ENSMUSG00000031728 Zfp821 zinc finger protein 821 -7.3955 0.0000
50992 ENSMUSG00000066197 Gpr139 G protein-coupled receptor 139 -7.3939 0.0000
50991 ENSMUSG00000065406 Mirlet7i microRNA let7i -7.3937 0.0000
50990 ENSMUSG00000107143 Gm6598 predicted gene 6598 -7.3864 0.0000
50989 ENSMUSG00000106751 Gm42467 predicted gene 42467 -7.3864 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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