SHOGoiN Cell Methylome: GSM1147597

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147597


Profile download
5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M14Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084274 Gm12504 predicted pseudogene 12504 7.9307 0.0000
2 ENSMUSG00000038608 Dock10 dedicator of cytokinesis 10 7.8455 0.0000
3 ENSMUSG00000103192 Gm37645 predicted gene, 37645 7.8455 0.0000
4 ENSMUSG00000020216 Jsrp1 junctional sarcoplasmic reticulum protein 1 7.8237 0.0000
5 ENSMUSG00000024738 Pga5 pepsinogen 5, group I 7.8009 0.0000
6 ENSMUSG00000109453 4930405G09Rik RIKEN cDNA 4930405G09 gene 7.7616 0.0000
7 ENSMUSG00000108849 Gm35147 predicted gene, 35147 7.5673 0.0000
8 ENSMUSG00000105032 Gm43117 predicted gene 43117 7.5275 0.0000
9 ENSMUSG00000043782 Bicdl2 BICD family like cargo adaptor 2 7.4757 0.0000
10 ENSMUSG00000027380 Acoxl acyl-Coenzyme A oxidase-like 7.3750 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000051251 Nhlh1 nescient helix loop helix 1 -7.7434 0.0000
51075 ENSMUSG00000057666 Gapdh glyceraldehyde-3-phosphate dehydrogenase -7.7431 0.0000
51074 ENSMUSG00000022890 Atp5j ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F -7.7333 0.0000
51073 ENSMUSG00000008976 Gabpa GA repeat binding protein, alpha -7.7333 0.0000
51072 ENSMUSG00000099031 Mir7240 microRNA 7240 -7.7231 0.0000
51071 ENSMUSG00000026750 Psmb7 proteasome (prosome, macropain) subunit, beta type 7 -7.7208 0.0000
51070 ENSMUSG00000024642 Tle4 transducin-like enhancer of split 4 -7.7199 0.0000
51069 ENSMUSG00000081376 Gm11694 predicted gene 11694 -7.6979 0.0000
51068 ENSMUSG00000020736 Nt5c 5',3'-nucleotidase, cytosolic -7.6979 0.0000
51067 ENSMUSG00000034290 Nek9 NIMA (never in mitosis gene a)-related expressed kinase 9 -7.6925 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...