SHOGoiN Cell Methylome: GSM1147598

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147598


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M15Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000091336 Gm17157 predicted gene 17157 8.0334 0.0000
2 ENSMUSG00000095762 Gm16378 predicted gene 16378 7.3436 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 7.3399 0.0000
4 ENSMUSG00000098502 Gm27511 predicted gene, 27511 7.3129 0.0000
5 ENSMUSG00000096753 Fam181a family with sequence similarity 181 member A 7.1497 0.0000
6 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.1497 0.0000
7 ENSMUSG00000045267 Tas2r119 taste receptor type 2 member 119 6.8703 0.0000
8 ENSMUSG00000005763 Cd247 T-cell surface glycoprotein CD3 zeta chain 6.7944 0.0000
9 ENSMUSG00000104801 Gm43834 predicted gene 43834 6.7631 0.0000
10 ENSMUSG00000106670 Gm44347 predicted gene, 44347 6.7549 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000029776 Hibadh 3-hydroxyisobutyrate dehydrogenase -6.8025 0.0000
50997 ENSMUSG00000091512 Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 -6.8008 0.0000
50996 ENSMUSG00000106829 Gm3786 predicted gene 3786 -6.7962 0.0000
50995 ENSMUSG00000058325 Dock1 Dedicator of cytokinesis protein 1 -6.7918 0.0000
50994 ENSMUSG00000087011 Gm12930 predicted gene 12930 -6.7875 0.0000
50993 ENSMUSG00000080152 Gm12260 predicted gene 12260 -6.7869 0.0000
50992 ENSMUSG00000020032 Nuak1 NUAK family SNF1-like kinase 1 -6.7815 0.0000
50991 ENSMUSG00000064672 Gm22806 predicted gene, 22806 -6.7814 0.0000
50990 ENSMUSG00000035139 Secisbp2 SECIS binding protein 2 -6.7814 0.0000
50989 ENSMUSG00000031812 Map1lc3b Microtubule-associated proteins 1A/1B light chain 3B -6.7814 0.0031

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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