SHOGoiN Cell Methylome: GSM1147598

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147598


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7030201-236Sequence Read ArchiveSRP023116SRP023116_M15Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliumBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000091336 Gm17157 predicted gene 17157 8.0334 0.0000
2 ENSMUSG00000095762 Gm16378 predicted gene 16378 7.3436 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 7.3399 0.0000
4 ENSMUSG00000098502 Gm27511 predicted gene, 27511 7.3129 0.0000
5 ENSMUSG00000096753 Fam181a family with sequence similarity 181, member A 7.1497 0.0000
6 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.1497 0.0000
7 ENSMUSG00000045267 Tas2r119 taste receptor, type 2, member 119 6.8703 0.0000
8 ENSMUSG00000005763 Cd247 CD247 antigen 6.7944 0.0000
9 ENSMUSG00000104801 Gm43834 predicted gene 43834 6.7631 0.0000
10 ENSMUSG00000106670 Gm44347 predicted gene, 44347 6.7549 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000019718 L3hypdh L-3-hydroxyproline dehydratase (trans-) -7.1212 0.0000
51075 ENSMUSG00000030956 Fam53b family with sequence similarity 53, member B -7.1197 0.0000
51074 ENSMUSG00000030207 Fam234b family with sequence similarity 234, member B -7.1192 0.0000
51073 ENSMUSG00000104786 Gm43573 predicted gene 43573 -7.1087 0.0000
51072 ENSMUSG00000104494 Gm37111 predicted gene, 37111 -7.1085 0.0000
51071 ENSMUSG00000025145 Lrrc45 leucine rich repeat containing 45 -7.1024 0.0000
51070 ENSMUSG00000017858 Ift52 intraflagellar transport 52 -7.0942 0.0000
51069 ENSMUSG00000096233 Gm13238 predicted gene 13238 -7.0941 0.0000
51068 ENSMUSG00000083235 Gm13246 predicted gene 13246 -7.0941 0.0000
51067 ENSMUSG00000000168 Dlat dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) -7.0910 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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