SHOGoiN Cell Methylome: GSM1147599

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147599


Profile download
5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M16Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000090095 Rpl29-ps1 ribosomal protein L29, pseudogene 1 9.7797 0.0000
2 ENSMUSG00000029179 Zcchc4 zinc finger, CCHC domain containing 4 9.1284 0.0000
3 ENSMUSG00000067750 Khdc1a KH homology domain-containing protein 1A 8.9773 0.0000
4 ENSMUSG00000086194 Gm16329 predicted gene 16329 8.9773 0.0000
5 ENSMUSG00000110372 Gm8096 predicted gene 8096 8.8880 0.0000
6 ENSMUSG00000109657 1700008N11Rik RIKEN cDNA 1700008N11 gene 8.8424 0.0000
7 ENSMUSG00000078439 Smim24 small integral membrane protein 24 8.6245 0.0000
8 ENSMUSG00000078440 Dohh Deoxyhypusine hydroxylase 8.6245 0.0000
9 ENSMUSG00000098811 Mir6913 microRNA 6913 8.6245 0.0000
10 ENSMUSG00000074570 Cass4 Cas scaffolding protein family member 4 8.5812 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000061577 Adgrg5 Adhesion G-protein coupled receptor G5 -8.7673 0.0000
50997 ENSMUSG00000103814 Gm38007 predicted gene, 38007 -8.7672 0.0000
50996 ENSMUSG00000099250 Rn7s2 7S RNA 2 -8.7603 0.0000
50995 ENSMUSG00000103572 Gm37115 predicted gene, 37115 -8.7599 0.0000
50994 ENSMUSG00000040782 Cop1 COP1, E3 ubiquitin ligase -8.7599 0.0000
50993 ENSMUSG00000021143 Pacs2 phosphofurin acidic cluster sorting protein 2 -8.7586 0.0000
50992 ENSMUSG00000051950 B3glct Beta-1,3-glucosyltransferase -8.7562 0.0000
50991 ENSMUSG00000105398 Gm47305 predicted gene, 47305 -8.7496 0.0000
50990 ENSMUSG00000105145 Gm47299 predicted gene, 47299 -8.7496 0.0000
50989 ENSMUSG00000020982 Nemf Nuclear export mediator factor Nemf -8.7496 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...