SHOGoiN Cell Methylome: GSM1147600

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147600


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M17Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000108581 Gm44896 predicted gene 44896 8.3004 0.0000
2 ENSMUSG00000015365 Mov10l1 Moloney leukemia virus 10-like 1 8.1687 0.0000
3 ENSMUSG00000073980 Gm9574 predicted gene 9574 7.9658 0.0000
4 ENSMUSG00000093419 Gm19898 predicted gene, 19898 7.9523 0.0000
5 ENSMUSG00000108506 Gm44705 predicted gene 44705 7.8826 0.0000
6 ENSMUSG00000105717 Gm43465 predicted gene 43465 7.8642 0.0000
7 ENSMUSG00000026100 Mstn myostatin 7.6653 0.0000
8 ENSMUSG00000092818 Gm27361 predicted gene, 27361 7.6414 0.0000
9 ENSMUSG00000042129 Rassf4 Ras association (RalGDS/AF-6) domain family member 4 7.6221 0.0000
10 ENSMUSG00000042064 Myo3b myosin IIIB 7.6055 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000024038 Ndufv3 NADH dehydrogenase (ubiquinone) flavoprotein 3 -7.6797 0.0000
51075 ENSMUSG00000024037 Wdr4 WD repeat domain 4 -7.6797 0.0000
51074 ENSMUSG00000091191 Gm17334 predicted gene, 17334 -7.6548 0.0000
51073 ENSMUSG00000044312 Neurog3 neurogenin 3 -7.6276 0.0000
51072 ENSMUSG00000097215 Gm26550 predicted gene, 26550 -7.6090 0.0000
51071 ENSMUSG00000041921 Metap1d methionyl aminopeptidase type 1D (mitochondrial) -7.5972 0.0000
51070 ENSMUSG00000024172 St6gal2 beta galactoside alpha 2,6 sialyltransferase 2 -7.5954 0.0000
51069 ENSMUSG00000020114 Cand1 cullin associated and neddylation disassociated 1 -7.5731 0.0000
51068 ENSMUSG00000040859 Bsdc1 BSD domain containing 1 -7.5600 0.0000
51067 ENSMUSG00000036904 Fzd8 frizzled class receptor 8 -7.5566 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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