SHOGoiN Cell Methylome: GSM1147600

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147600


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M17Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000108581 Gm44896 predicted gene 44896 8.3004 0.0000
2 ENSMUSG00000015365 Mov10l1 Mov10 RISC complex RNA helicase like 1 8.1687 0.0000
3 ENSMUSG00000073980 Gm9574 predicted gene 9574 7.9658 0.0000
4 ENSMUSG00000093419 Gm19898 predicted gene, 19898 7.9523 0.0000
5 ENSMUSG00000108506 Gm44705 predicted gene 44705 7.8826 0.0000
6 ENSMUSG00000105717 Gm43465 predicted gene 43465 7.8642 0.0000
7 ENSMUSG00000026100 Mstn myostatin 7.6653 0.0000
8 ENSMUSG00000092818 Gm27361 predicted gene, 27361 7.6414 0.0000
9 ENSMUSG00000042129 Rassf4 Ras association domain-containing protein 4 7.6221 0.0000
10 ENSMUSG00000042064 Myo3b Myosin-IIIb 7.6055 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000038691 Mbd3l1 methyl-CpG binding domain protein 3-like 1 -7.2525 0.0000
50997 ENSMUSG00000021036 Sptlc2 serine palmitoyltransferase, long chain base subunit 2 -7.2496 0.0000
50996 ENSMUSG00000073460 Pnldc1 Poly(A)-specific ribonuclease PNLDC1 -7.2489 0.0000
50995 ENSMUSG00000111646 Gm40621 predicted gene, 40621 -7.2469 0.0000
50994 ENSMUSG00000111090 Gm30698 predicted gene, 30698 -7.2469 0.0000
50993 ENSMUSG00000038876 Rnf146 ring finger protein 146 -7.2469 0.0000
50992 ENSMUSG00000029005 Draxin Draxin -7.2445 0.0000
50991 ENSMUSG00000024095 Hnrnpll Heteroous nuclear ribonucleoprotein L-like -7.2435 0.0000
50990 ENSMUSG00000020262 Adarb1 Double-stranded RNA-specific editase 1 -7.2424 0.0000
50989 ENSMUSG00000018899 Irf1 interferon regulatory factor 1 -7.2386 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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