SHOGoiN Cell Methylome: GSM1147603

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147603


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M20Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104610 Gm567 predicted gene 567 5.4460 0.0000
2 ENSMUSG00000025461 Cd163l1 CD163 molecule-like 1 5.1699 0.0000
3 ENSMUSG00000045318 Adra2c adrenergic receptor, alpha 2c 5.1699 0.0000
4 ENSMUSG00000028093 Acp6 acid phosphatase 6, lysophosphatidic 5.1153 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 5.0530 0.0000
6 ENSMUSG00000001120 Pcbp3 poly(rC) binding protein 3 5.0444 0.0000
7 ENSMUSG00000103930 Gm36961 predicted gene, 36961 5.0444 0.0000
8 ENSMUSG00000036040 Adamtsl2 ADAMTS-like 2 5.0000 0.0000
9 ENSMUSG00000098881 Mir6927 microRNA 6927 5.0000 0.0000
10 ENSMUSG00000033294 Noc4l NOC4 like 4.9542 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000021062 Rab15 RAB15, member RAS oncogene family -5.6281 0.0000
51075 ENSMUSG00000002274 Metrn meteorin, glial cell differentiation regulator -5.6217 0.0000
51074 ENSMUSG00000109388 Gm44688 predicted gene 44688 -5.6113 0.0000
51073 ENSMUSG00000000266 Mid2 midline 2 -5.6098 0.0000
51072 ENSMUSG00000083528 Gm13432 predicted gene 13432 -5.6095 0.0000
51071 ENSMUSG00000030275 Etnk1 ethanolamine kinase 1 -5.5901 0.0000
51070 ENSMUSG00000050824 Sstr5 somatostatin receptor 5 -5.5884 0.0000
51069 ENSMUSG00000079737 3110001I22Rik RIKEN cDNA 3110001I22 gene -5.5850 0.0000
51068 ENSMUSG00000048007 Timm8a1 translocase of inner mitochondrial membrane 8A1 -5.5850 0.0000
51067 ENSMUSG00000022685 Parn poly(A)-specific ribonuclease (deadenylation nuclease) -5.5850 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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