SHOGoiN Cell Methylome: GSM1147603

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147603


Profile download
7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M20Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104610 Gm567 predicted gene 567 5.4460 0.0000
2 ENSMUSG00000025461 Cd163l1 CD163 molecule-like 1 5.1699 0.0000
3 ENSMUSG00000045318 Adra2c Alpha-2C adrenergic receptor 5.1699 0.0000
4 ENSMUSG00000028093 Acp6 Lysophosphatidic acid phosphatase type 6 5.1153 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 5.0530 0.0000
6 ENSMUSG00000001120 Pcbp3 Mus musculus poly(rC) binding protein 3 (Pcbp3), transcript variant 2, mRNA. 5.0444 0.0000
7 ENSMUSG00000103930 Gm36961 predicted gene, 36961 5.0444 0.0000
8 ENSMUSG00000036040 Adamtsl2 ADAMTS-like protein 2 5.0000 0.0000
9 ENSMUSG00000098881 Mir6927 microRNA 6927 5.0000 0.0000
10 ENSMUSG00000033294 Noc4l Nucleolar complex 4.9542 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000054843 Atrnl1 Attractin-like protein 1 -5.3645 0.0000
50997 ENSMUSG00000003581 Rnf215 RING finger protein 215 -5.3587 0.0000
50996 ENSMUSG00000051067 Lingo3 Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 -5.3576 0.0000
50995 ENSMUSG00000049641 Vgll2 vestigial like family member 2 -5.3576 0.0000
50994 ENSMUSG00000041238 Rbbp8 retinoblastoma binding protein 8, endonuclease -5.3418 0.0000
50993 ENSMUSG00000020415 Pttg1 Securin -5.3232 0.0000
50992 ENSMUSG00000018217 Pmp22 peripheral myelin protein 22 isoform 2 -5.3219 0.0000
50991 ENSMUSG00000102766 Gm6420 NA -5.3079 0.0000
50990 ENSMUSG00000033799 Fam208b Protein FAM208B -5.2984 0.0000
50989 ENSMUSG00000111301 Gm30671 predicted gene, 30671 -5.2974 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...