SHOGoiN Cell Methylome: GSM1147604

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147604


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M21Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000097152 Gm26515 predicted gene, 26515 6.7279 0.0000
2 ENSMUSG00000110111 Gm7786 predicted gene 7786 6.7279 0.0000
3 ENSMUSG00000023274 Cd4 CD4 antigen 6.6380 0.0000
4 ENSMUSG00000110170 St6galnac2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 6.2479 0.0000
5 ENSMUSG00000084191 Gm15167 predicted gene 15167 6.1699 0.0000
6 ENSMUSG00000093409 Gm25193 predicted gene, 25193 6.1293 0.0000
7 ENSMUSG00000097731 2700016F22Rik RIKEN cDNA 2700016F22 gene 6.0661 0.0000
8 ENSMUSG00000102928 Ighv1-46 immunoglobulin heavy variable V1-46 6.0661 0.0000
9 ENSMUSG00000037627 Rgs22 regulator of G-protein signalling 22 6.0444 0.0000
10 ENSMUSG00000054446 Cpa1 carboxypeptidase A1, pancreatic 6.0444 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000086108 Gm5602 predicted gene 5602 -6.1934 0.0000
51075 ENSMUSG00000069516 Lyz2 lysozyme 2 -6.1898 0.0000
51074 ENSMUSG00000067071 Hes6 hairy and enhancer of split 6 -6.1898 0.0000
51073 ENSMUSG00000062248 Cks2 CDC28 protein kinase regulatory subunit 2 -6.1796 0.0000
51072 ENSMUSG00000060798 Intu inturned planar cell polarity protein -6.1699 0.0000
51071 ENSMUSG00000040990 Sh3kbp1 SH3-domain kinase binding protein 1 -6.1694 0.0000
51070 ENSMUSG00000077557 Gm23706 predicted gene, 23706 -6.1617 0.0000
51069 ENSMUSG00000048661 Lemd3 LEM domain containing 3 -6.1613 0.0000
51068 ENSMUSG00000024317 Rnf138 ring finger protein 138 -6.1550 0.0000
51067 ENSMUSG00000042182 Bend6 BEN domain containing 6 -6.1545 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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