SHOGoiN Cell Methylome: GSM1147605

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147605


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M22Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000087823 Gm22281 predicted gene, 22281 6.9542 0.0000
2 ENSMUSG00000107728 Gm38910 predicted gene, 38910 6.7279 0.0000
3 ENSMUSG00000109602 Gm31597 predicted gene, 31597 6.6147 0.0000
4 ENSMUSG00000105087 Gm42552 predicted gene 42552 6.5660 0.0000
5 ENSMUSG00000089709 Gm16262 predicted gene 16262 6.4919 0.0000
6 ENSMUSG00000111575 NA 6.4429 0.0000
7 ENSMUSG00000081605 Gm15953 predicted gene 15953 6.4263 0.0000
8 ENSMUSG00000103435 Gm36992 predicted gene, 36992 6.3038 0.0000
9 ENSMUSG00000104154 Gm38104 predicted gene, 38104 6.3038 0.0000
10 ENSMUSG00000009487 Otog otogelin 6.0224 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000024579 Pcyox1l prenylcysteine oxidase 1 like -6.6023 0.0000
51075 ENSMUSG00000007777 0610009B22Rik RIKEN cDNA 0610009B22 gene -6.5997 0.0000
51074 ENSMUSG00000037761 Actr5 ARP5 actin-related protein 5 -6.5983 0.0000
51073 ENSMUSG00000057541 Pus7 pseudouridylate synthase 7 -6.5906 0.0000
51072 ENSMUSG00000028999 Rint1 RAD50 interactor 1 -6.5906 0.0000
51071 ENSMUSG00000083397 Gm5466 predicted gene 5466 -6.5878 0.0000
51070 ENSMUSG00000109511 Nup62 nucleoporin 62 -6.5854 0.0000
51069 ENSMUSG00000044502 Bod1 biorientation of chromosomes in cell division 1 -6.5793 0.0000
51068 ENSMUSG00000039480 Nt5dc1 5'-nucleotidase domain containing 1 -6.5778 0.0000
51067 ENSMUSG00000028035 Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 -6.5757 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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