SHOGoiN Cell Methylome: GSM1147605

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147605


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M22Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000087823 Gm22281 predicted gene, 22281 6.9542 0.0000
2 ENSMUSG00000107728 Gm38910 predicted gene, 38910 6.7279 0.0000
3 ENSMUSG00000109602 Gm31597 predicted gene, 31597 6.6147 0.0000
4 ENSMUSG00000105087 Gm42552 predicted gene 42552 6.5660 0.0000
5 ENSMUSG00000089709 Gm16262 predicted gene 16262 6.4919 0.0000
6 ENSMUSG00000111575 Gm47926 predicted gene, 47926 6.4429 0.0000
7 ENSMUSG00000081605 Gm15953 predicted gene 15953 6.4263 0.0000
8 ENSMUSG00000103435 Gm36992 predicted gene, 36992 6.3038 0.0000
9 ENSMUSG00000104154 Gm38104 predicted gene, 38104 6.3038 0.0000
10 ENSMUSG00000009487 Otog otogelin 6.0224 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000049641 Vgll2 vestigial like family member 2 -6.1721 0.0000
50997 ENSMUSG00000100936 Gm28865 predicted gene 28865 -6.1699 0.0002
50996 ENSMUSG00000047963 Stbd1 starch binding domain 1 -6.1696 0.0000
50995 ENSMUSG00000032259 Drd2 D(2) dopamine receptor -6.1651 0.0000
50994 ENSMUSG00000109632 Gm31479 predicted gene, 31479 -6.1642 0.0000
50993 ENSMUSG00000106554 Gm33474 predicted gene, 33474 -6.1634 0.0002
50992 ENSMUSG00000029334 Prkg2 protein kinase, cGMP-dependent, type II -6.1623 0.0000
50991 ENSMUSG00000048458 Fam212b PAK4-inhibitor INKA2 -6.1531 0.0000
50990 ENSMUSG00000093445 Lrch4 Leucine-rich repeat and calponin homology domain-containing protein 4 -6.1466 0.0000
50989 ENSMUSG00000021536 Adcy2 adenylate cyclase 2 -6.1442 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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