SHOGoiN Cell Methylome: GSM1147606

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147606


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M23Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000022683 Pla2g10 phospholipase A2, group X 7.4512 0.0000
2 ENSMUSG00000086550 Pla2g10os phospholipase A2, group X, opposite strand 7.4512 0.0000
3 ENSMUSG00000088236 Gm25425 predicted gene, 25425 7.2288 0.0000
4 ENSMUSG00000024220 Zfp523 zinc finger protein 523 7.2185 0.0000
5 ENSMUSG00000044312 Neurog3 neurogenin 3 7.2082 0.0000
6 ENSMUSG00000082341 Gm14143 predicted gene 14143 7.1799 0.0000
7 ENSMUSG00000029608 Rph3a rabphilin 3A 6.9396 0.0000
8 ENSMUSG00000025221 Kcnip2 Kv channel-interacting protein 2 6.9069 0.0000
9 ENSMUSG00000057945 Gm17136 predicted gene 17136 6.8455 0.0000
10 ENSMUSG00000110701 Gm6013 predicted gene 6013 6.8150 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000040621 Gemin8 gem nuclear organelle associated protein 8 -6.6601 0.0000
51075 ENSMUSG00000030275 Etnk1 ethanolamine kinase 1 -6.6601 0.0000
51074 ENSMUSG00000025921 Rdh10 retinol dehydrogenase 10 (all-trans) -6.6517 0.0000
51073 ENSMUSG00000072768 Gm10418 predicted gene 10418 -6.6426 0.0000
51072 ENSMUSG00000037860 Aim2 absent in melanoma 2 -6.6402 0.0000
51071 ENSMUSG00000048148 Nwd1 NACHT and WD repeat domain containing 1 -6.6294 0.0000
51070 ENSMUSG00000001998 Ap4e1 adaptor-related protein complex AP-4, epsilon 1 -6.6147 0.0000
51069 ENSMUSG00000022498 Txndc11 thioredoxin domain containing 11 -6.6110 0.0000
51068 ENSMUSG00000079259 Trim71 tripartite motif-containing 71 -6.6068 0.0000
51067 ENSMUSG00000042447 Mios missing oocyte, meiosis regulator, homolog (Drosophila) -6.5999 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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