SHOGoiN Cell Methylome: GSM1147607

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147607


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9010000-769Sequence Read ArchiveSRP023116SRP023116_M24Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000092751 Mir3080 microRNA 3080 8.7640 0.0000
2 ENSMUSG00000104967 Gm43436 predicted gene 43436 8.2036 0.0000
3 ENSMUSG00000045267 Tas2r119 taste receptor, type 2, member 119 8.0768 0.0000
4 ENSMUSG00000094202 Mup-ps26 major urinary protein, pseudogene 26 8.0112 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 7.8138 0.0000
6 ENSMUSG00000022831 Hcls1 hematopoietic cell specific Lyn substrate 1 7.7437 0.0000
7 ENSMUSG00000024777 Ppp2r5b protein phosphatase 2, regulatory subunit B', beta 7.7415 0.0000
8 ENSMUSG00000038608 Dock10 dedicator of cytokinesis 10 7.7142 0.0000
9 ENSMUSG00000103192 Gm37645 predicted gene, 37645 7.7142 0.0000
10 ENSMUSG00000089916 Gm16160 predicted gene 16160 7.7074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000024588 Fech ferrochelatase -7.6955 0.0000
51075 ENSMUSG00000111842 NA -7.6949 0.0000
51074 ENSMUSG00000038895 Zfp653 zinc finger protein 653 -7.6949 0.0000
51073 ENSMUSG00000021702 Thbs4 thrombospondin 4 -7.6852 0.0000
51072 ENSMUSG00000047171 Helt helt bHLH transcription factor -7.6732 0.0000
51071 ENSMUSG00000000197 Nalcn sodium leak channel, non-selective -7.6716 0.0000
51070 ENSMUSG00000050641 BC048562 cDNA sequence BC048562 -7.6693 0.0000
51069 ENSMUSG00000071113 Mboat4 membrane bound O-acyltransferase domain containing 4 -7.6677 0.0000
51068 ENSMUSG00000063412 Gm10131 predicted pseudogene 10131 -7.6677 0.0000
51067 ENSMUSG00000031516 Dctn6 dynactin 6 -7.6677 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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