SHOGoiN Cell Methylome: GSM1147607

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147607


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M24Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000092751 Mir3080 microRNA 3080 8.7640 0.0000
2 ENSMUSG00000104967 Gm43436 predicted gene 43436 8.2036 0.0000
3 ENSMUSG00000045267 Tas2r119 taste receptor type 2 member 119 8.0768 0.0000
4 ENSMUSG00000094202 Mup-ps26 major urinary protein, pseudogene 26 8.0112 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 7.8138 0.0000
6 ENSMUSG00000022831 Hcls1 Hematopoietic lineage cell-specific protein 7.7437 0.0000
7 ENSMUSG00000024777 Ppp2r5b protein phosphatase 2, regulatory subunit B', beta 7.7415 0.0000
8 ENSMUSG00000038608 Dock10 dedicator of cytokinesis 10 7.7142 0.0000
9 ENSMUSG00000103192 Gm37645 predicted gene, 37645 7.7142 0.0000
10 ENSMUSG00000089916 Gm16160 predicted gene 16160 7.7074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000032046 Abhd12 abhydrolase domain containing 12 -7.4662 0.0000
50997 ENSMUSG00000060935 Tmem263 Transmembrane protein 263 -7.4621 0.0000
50996 ENSMUSG00000044164 Rnf182 E3 ubiquitin-protein ligase RNF182 -7.4610 0.0000
50995 ENSMUSG00000025326 Ube3a ubiquitin protein ligase E3A -7.4594 0.0002
50994 ENSMUSG00000020105 Lrig3 Leucine-rich repeats and immunoglobulin-like domains protein 3 -7.4565 0.0000
50993 ENSMUSG00000058897 Col25a1 Collagen alpha-1(XXV) chain Collagen-like Alzheimer amyloid plaque component -7.4512 0.0000
50992 ENSMUSG00000027439 Gzf1 Mus musculus GDNF-inducible zinc finger protein 1 (Gzf1), transcript variant 1, mRNA. -7.4461 0.0000
50991 ENSMUSG00000110408 Gm45881 predicted gene 45881 -7.4429 0.0002
50990 ENSMUSG00000112218 Gm18726 predicted gene, 18726 -7.4400 0.0000
50989 ENSMUSG00000026018 Ica1l Mus musculus islet cell autoantigen 1-like (Ica1l), transcript variant 4, mRNA. -7.4397 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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