SHOGoiN Cell Methylome: GSM1147608

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147608


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M25Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000098516 Mir7651 microRNA 7651 7.2798 0.0000
2 ENSMUSG00000085025 Gm13715 predicted gene 13715 7.2479 0.0000
3 ENSMUSG00000010797 Wnt2 wingless-type MMTV integration site family, member 2 7.1204 0.0000
4 ENSMUSG00000033955 Tnks1bp1 182 kDa tankyrase-1-binding protein 7.0625 0.0000
5 ENSMUSG00000096992 Gm26788 predicted gene, 26788 7.0381 0.0000
6 ENSMUSG00000068324 Gm10029 predicted gene 10029 6.9658 0.0000
7 ENSMUSG00000067835 Gm14661 predicted gene 14661 6.9410 0.0000
8 ENSMUSG00000064558 Gm24620 predicted gene, 24620 6.8948 0.0000
9 ENSMUSG00000084052 Gm11745 predicted gene 11745 6.8291 0.0000
10 ENSMUSG00000041794 Myrip Rab effector MyRIP 6.5545 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000097115 1810019N24Rik RIKEN cDNA 1810019N24 gene -6.5736 0.0000
50997 ENSMUSG00000039179 Tekt5 Tektin-5 -6.5673 0.0000
50996 ENSMUSG00000046841 Ckap4 Cytoskeleton-associated protein 4 -6.5654 0.0000
50995 ENSMUSG00000104148 Pcdha2 protocadherin alpha 2 -6.5604 0.0000
50994 ENSMUSG00000103386 Gm37751 predicted gene, 37751 -6.5604 0.0000
50993 ENSMUSG00000029330 Cds1 Phosphatidate cytidylyltransferase 1 -6.5528 0.0000
50992 ENSMUSG00000111596 Gm8058 predicted gene 8058 -6.5510 0.0000
50991 ENSMUSG00000045975 C2cd2 C2 domain-containing protein 2 -6.5494 0.0000
50990 ENSMUSG00000042029 Ncapg2 non-SMC condensin II complex, subunit G2 -6.5476 0.0000
50989 ENSMUSG00000110239 Gm45620 predicted gene 45620 -6.5442 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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