SHOGoiN Cell Methylome: GSM1147608

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147608


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9010000-769Sequence Read ArchiveSRP023116SRP023116_M25Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000098516 Mir7651 microRNA 7651 7.2798 0.0000
2 ENSMUSG00000085025 Gm13715 predicted gene 13715 7.2479 0.0000
3 ENSMUSG00000010797 Wnt2 wingless-type MMTV integration site family, member 2 7.1204 0.0000
4 ENSMUSG00000033955 Tnks1bp1 tankyrase 1 binding protein 1 7.0625 0.0000
5 ENSMUSG00000096992 Gm26788 predicted gene, 26788 7.0381 0.0000
6 ENSMUSG00000068324 Gm10029 predicted gene 10029 6.9658 0.0000
7 ENSMUSG00000067835 Gm14661 predicted gene 14661 6.9410 0.0000
8 ENSMUSG00000064558 Gm24620 predicted gene, 24620 6.8948 0.0000
9 ENSMUSG00000084052 Gm11745 predicted gene 11745 6.8291 0.0000
10 ENSMUSG00000041794 Myrip myosin VIIA and Rab interacting protein 6.5545 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000089088 Gm24001 predicted gene, 24001 -6.9021 0.0000
51075 ENSMUSG00000080356 Mir1247 microRNA 1247 -6.8986 0.0000
51074 ENSMUSG00000042590 Ipo11 importin 11 -6.8929 0.0000
51073 ENSMUSG00000020905 Usp43 ubiquitin specific peptidase 43 -6.8892 0.0000
51072 ENSMUSG00000082016 Pgam1-ps2 phosphoglycerate mutase 1, pseudogene 2 -6.8874 0.0000
51071 ENSMUSG00000079109 Pms2 postmeiotic segregation increased 2 (S. cerevisiae) -6.8791 0.0000
51070 ENSMUSG00000029610 Aimp2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 -6.8791 0.0000
51069 ENSMUSG00000037014 Sstr4 somatostatin receptor 4 -6.8654 0.0000
51068 ENSMUSG00000033705 Stard9 START domain containing 9 -6.8631 0.0000
51067 ENSMUSG00000028199 Cryz crystallin, zeta -6.8512 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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