SHOGoiN Cell Methylome: GSM1147609

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147609


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M26Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084048 Gm12042 predicted gene 12042 5.5655 0.0000
2 ENSMUSG00000112677 Gm48868 predicted gene, 48868 5.5546 0.0000
3 ENSMUSG00000085936 2610307P16Rik RIKEN cDNA 2610307P16 gene 5.4290 0.0000
4 ENSMUSG00000103095 Gm37557 predicted gene, 37557 5.3576 0.0000
5 ENSMUSG00000082871 Gm13263 predicted gene 13263 5.2854 0.0000
6 ENSMUSG00000062190 Lancl2 LanC-like protein 2 5.2095 0.0000
7 ENSMUSG00000057037 Cfhr1 complement factor H-related 1 5.0986 0.0000
8 ENSMUSG00000087345 Gm13746 predicted gene 13746 5.0875 0.0000
9 ENSMUSG00000020100 Slc29a3 Equilibrative nucleoside transporter 3 5.0444 0.0000
10 ENSMUSG00000031651 Triml1 tripartite motif family-like 1 5.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000042429 Adora1 adenosine A1 receptor -5.3438 0.0000
50997 ENSMUSG00000050549 Fam241a Uncharacterized protein FAM241A -5.3437 0.0000
50996 ENSMUSG00000052291 5330438D12Rik RIKEN cDNA 5330438D12 gene -5.3383 0.0000
50995 ENSMUSG00000020166 Cnot2 Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 6, mRNA. -5.3383 0.0000
50994 ENSMUSG00000095789 Nupr1l Mus musculus nuclear protein transcriptional regulator 1 like (Nupr1l), transcript variant 1, mRNA. -5.3286 0.0000
50993 ENSMUSG00000001472 Tcf25 Transcription factor 25 -5.3268 0.0000
50992 ENSMUSG00000107432 Gm36189 predicted gene, 36189 -5.3219 0.0000
50991 ENSMUSG00000098541 Gm27535 predicted gene, 27535 -5.3219 0.0033
50990 ENSMUSG00000054493 Gm9947 predicted gene 9947 -5.3219 0.0000
50989 ENSMUSG00000041957 Pkp2 plakophilin 2 -5.3219 0.2755

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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