SHOGoiN Cell Methylome: GSM1147609

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147609


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M26Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084048 Gm12042 predicted gene 12042 5.5655 0.0000
2 ENSMUSG00000112677 NA 5.5546 0.0000
3 ENSMUSG00000085936 2610307P16Rik RIKEN cDNA 2610307P16 gene 5.4290 0.0000
4 ENSMUSG00000103095 Gm37557 predicted gene, 37557 5.3576 0.0000
5 ENSMUSG00000082871 Gm13263 predicted gene 13263 5.2854 0.0000
6 ENSMUSG00000062190 Lancl2 LanC (bacterial lantibiotic synthetase component C)-like 2 5.2095 0.0000
7 ENSMUSG00000057037 Cfhr1 complement factor H-related 1 5.0986 0.0000
8 ENSMUSG00000087345 Gm13746 predicted gene 13746 5.0875 0.0000
9 ENSMUSG00000020100 Slc29a3 solute carrier family 29 (nucleoside transporters), member 3 5.0444 0.0000
10 ENSMUSG00000031651 Triml1 tripartite motif family-like 1 5.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000057614 Gnai1 guanine nucleotide binding protein (G protein), alpha inhibiting 1 -5.5719 0.0000
51075 ENSMUSG00000024588 Fech ferrochelatase -5.5615 0.0000
51074 ENSMUSG00000062929 Cfl2 cofilin 2, muscle -5.5546 0.0000
51073 ENSMUSG00000041762 Gpr155 G protein-coupled receptor 155 -5.5546 0.0101
51072 ENSMUSG00000017639 Rab11fip4 RAB11 family interacting protein 4 (class II) -5.5546 0.1814
51071 ENSMUSG00000025060 Slk STE20-like kinase -5.5535 0.0000
51070 ENSMUSG00000021559 Dapk1 death associated protein kinase 1 -5.5498 0.0000
51069 ENSMUSG00000053846 Lipg lipase, endothelial -5.5484 0.0000
51068 ENSMUSG00000110580 D830024N08Rik RIKEN cDNA D830024N08 gene -5.5434 0.0000
51067 ENSMUSG00000064543 Gm22979 predicted gene, 22979 -5.5368 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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