SHOGoiN Cell Methylome: GSM1200273

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1200273


Profile download
5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M29Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000030996 Art1 ADP-ribosyltransferase 1 5.9386 0.0000
2 ENSMUSG00000070424 Art5 ADP-ribosyltransferase 5 5.9386 0.0000
3 ENSMUSG00000003546 Klc4 kinesin light chain 4 5.7137 0.0000
4 ENSMUSG00000105291 Gm18901 predicted gene, 18901 5.6147 0.0000
5 ENSMUSG00000105309 Gm21461 predicted gene, 21461 5.5850 0.0000
6 ENSMUSG00000031927 1700012B09Rik RIKEN cDNA 1700012B09 gene 5.5698 0.0000
7 ENSMUSG00000067610 Klri1 killer cell lectin-like receptor family I member 1 5.5691 0.0000
8 ENSMUSG00000009585 Apobec3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 5.5546 0.0000
9 ENSMUSG00000064550 Gm24623 predicted gene, 24623 5.4131 0.0000
10 ENSMUSG00000105871 Gm43147 predicted gene 43147 5.4131 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000063838 Cdc42ep5 CDC42 effector protein (Rho GTPase binding) 5 -5.1493 0.0000
51075 ENSMUSG00000022443 Myh9 myosin, heavy polypeptide 9, non-muscle -5.1468 0.0000
51074 ENSMUSG00000097557 C130060C02Rik RIKEN cDNA C130060C02 gene -5.1437 0.0000
51073 ENSMUSG00000041491 Cep78 centrosomal protein 78 -5.1437 0.0000
51072 ENSMUSG00000078931 Pdf peptide deformylase (mitochondrial) -5.1437 0.0000
51071 ENSMUSG00000003131 Pafah1b2 platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 -5.1339 0.0000
51070 ENSMUSG00000098241 H2-Pa histocompatibility 2, P region alpha locus -5.1293 0.0702
51069 ENSMUSG00000038658 Ric1 RAB6A GEF complex partner 1 -5.1240 0.0000
51068 ENSMUSG00000085112 A530072M11Rik RIKEN cDNA gene A530072M11 -5.1194 0.0000
51067 ENSMUSG00000112794 NA -5.1162 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...