SHOGoiN Cell Methylome: GSM1370523
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1370523 Profile download | 5030203000000000000000-761 | Sequence Read Archive | SRP041257 | SRP041257_M2 | Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity | Methylome | Secondary oocyte (Ovarian follicle) | Mouse | Genitalia | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000063656 | Gm10135 | predicted gene 10135 | 2.8774 | 0.0000 |
| 2 | ENSMUSG00000088268 | Gm24776 | predicted gene, 24776 | 2.8774 | 0.0000 |
| 3 | ENSMUSG00000103912 | Gm33819 | predicted gene, 33819 | 2.8074 | 0.0000 |
| 4 | ENSMUSG00000110865 | NA | 2.8074 | 0.0000 | |
| 5 | ENSMUSG00000042938 | Gm14117 | predicted gene 14117 | 2.6455 | 0.0000 |
| 6 | ENSMUSG00000081439 | Gm7840 | predicted gene 7840 | 2.6055 | 0.0000 |
| 7 | ENSMUSG00000060701 | Fpr-rs3 | formyl peptide receptor, related sequence 3 | 2.5850 | 0.0000 |
| 8 | ENSMUSG00000064477 | Gm23404 | predicted gene, 23404 | 2.5850 | 0.0001 |
| 9 | ENSMUSG00000074284 | Gm10658 | predicted gene 10658 | 2.5850 | 0.0001 |
| 10 | ENSMUSG00000075107 | Olfr1216 | olfactory receptor 1216 | 2.5850 | 0.0001 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 51076 | ENSMUSG00000096885 | Gm21797 | predicted gene, 21797 | -3.7004 | 0.1641 |
| 51075 | ENSMUSG00000101278 | Gm29381 | predicted gene 29381 | -3.6439 | 0.2463 |
| 51074 | ENSMUSG00000099829 | Gm29380 | predicted gene 29380 | -3.6439 | 0.2463 |
| 51073 | ENSMUSG00000101170 | Gm29343 | predicted gene 29343 | -3.5850 | 0.3836 |
| 51072 | ENSMUSG00000099643 | Gm29162 | predicted gene 29162 | -3.5850 | 0.3836 |
| 51071 | ENSMUSG00000099355 | Gm29342 | predicted gene 29342 | -3.5850 | 0.3836 |
| 51070 | ENSMUSG00000101804 | Gm28813 | predicted gene 28813 | -3.4594 | 0.3757 |
| 51069 | ENSMUSG00000101508 | Gm28832 | predicted gene 28832 | -3.4594 | 0.3757 |
| 51068 | ENSMUSG00000100915 | Gm29321 | predicted gene 29321 | -3.4594 | 0.3545 |
| 51067 | ENSMUSG00000099780 | Gm29537 | predicted gene 29537 | -3.4594 | 0.3757 |
