SHOGoiN Cell Methylome: GSM1370523
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1370523 Profile download | 5030203000000000000000-761 | Sequence Read Archive | SRP041257 | SRP041257_M2 | Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity | Methylome | Secondary oocyte (Ovarian follicle) | Mouse | Genitalia | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000063656 | Gm10135 | NA | 2.8774 | 0.0000 |
| 2 | ENSMUSG00000088268 | Gm24776 | predicted gene, 24776 | 2.8774 | 0.0000 |
| 3 | ENSMUSG00000103912 | Gm33819 | predicted gene, 33819 | 2.8074 | 0.0000 |
| 4 | ENSMUSG00000110865 | Gm47046 | predicted gene, 47046 | 2.8074 | 0.0000 |
| 5 | ENSMUSG00000042938 | Gm14117 | predicted gene 14117 | 2.6455 | 0.0000 |
| 6 | ENSMUSG00000081439 | Gm7840 | predicted gene 7840 | 2.6055 | 0.0000 |
| 7 | ENSMUSG00000060701 | Fpr-rs3 | Formyl peptide receptor-related sequence 3 | 2.5850 | 0.0000 |
| 8 | ENSMUSG00000064477 | Gm23404 | predicted gene, 23404 | 2.5850 | 0.0001 |
| 9 | ENSMUSG00000074284 | Gm10658 | NA | 2.5850 | 0.0001 |
| 10 | ENSMUSG00000075107 | Olfr1216 | NA | 2.5850 | 0.0001 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50998 | ENSMUSG00000036167 | Pphln1 | periphilin 1 | -2.4737 | 0.0000 |
| 50997 | ENSMUSG00000102615 | Gm37844 | predicted gene, 37844 | -2.4684 | 0.0000 |
| 50996 | ENSMUSG00000029817 | Tra2a | transformer 2 alpha | -2.4633 | 0.0000 |
| 50995 | ENSMUSG00000091288 | Gm17075 | predicted gene 17075 | -2.4534 | 0.3545 |
| 50994 | ENSMUSG00000089210 | Gm23386 | predicted gene, 23386 | -2.4534 | 0.3754 |
| 50993 | ENSMUSG00000110583 | Gm7639 | predicted gene 7639 | -2.4451 | 0.0002 |
| 50992 | ENSMUSG00000054450 | Gm9945 | NA | -2.4430 | 0.0000 |
| 50991 | ENSMUSG00000044352 | Sowaha | Ankyrin repeat domain-containing protein SOWAHA | -2.4430 | 0.0000 |
| 50990 | ENSMUSG00000097833 | Gm5976 | predicted gene 5976 | -2.4299 | 0.0000 |
| 50989 | ENSMUSG00000092812 | Gm23634 | predicted gene, 23634 | -2.4221 | 0.0002 |
