SHOGoiN Cell Methylome: GSM1370523

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370523


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6020500-761Sequence Read ArchiveSRP041257SRP041257_M2Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000063656 Gm10135 predicted gene 10135 2.8774 0.0000
2 ENSMUSG00000088268 Gm24776 predicted gene, 24776 2.8774 0.0000
3 ENSMUSG00000103912 Gm33819 predicted gene, 33819 2.8074 0.0000
4 ENSMUSG00000110865 NA 2.8074 0.0000
5 ENSMUSG00000042938 Gm14117 predicted gene 14117 2.6455 0.0000
6 ENSMUSG00000081439 Gm7840 predicted gene 7840 2.6055 0.0000
7 ENSMUSG00000060701 Fpr-rs3 formyl peptide receptor, related sequence 3 2.5850 0.0000
8 ENSMUSG00000064477 Gm23404 predicted gene, 23404 2.5850 0.0001
9 ENSMUSG00000074284 Gm10658 predicted gene 10658 2.5850 0.0001
10 ENSMUSG00000075107 Olfr1216 olfactory receptor 1216 2.5850 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000096885 Gm21797 predicted gene, 21797 -3.7004 0.1641
51075 ENSMUSG00000101278 Gm29381 predicted gene 29381 -3.6439 0.2463
51074 ENSMUSG00000099829 Gm29380 predicted gene 29380 -3.6439 0.2463
51073 ENSMUSG00000101170 Gm29343 predicted gene 29343 -3.5850 0.3836
51072 ENSMUSG00000099643 Gm29162 predicted gene 29162 -3.5850 0.3836
51071 ENSMUSG00000099355 Gm29342 predicted gene 29342 -3.5850 0.3836
51070 ENSMUSG00000101804 Gm28813 predicted gene 28813 -3.4594 0.3757
51069 ENSMUSG00000101508 Gm28832 predicted gene 28832 -3.4594 0.3757
51068 ENSMUSG00000100915 Gm29321 predicted gene 29321 -3.4594 0.3545
51067 ENSMUSG00000099780 Gm29537 predicted gene 29537 -3.4594 0.3757

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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