SHOGoiN Cell Methylome: GSM1370523

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370523


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M2Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000063656 Gm10135 NA 2.8774 0.0000
2 ENSMUSG00000088268 Gm24776 predicted gene, 24776 2.8774 0.0000
3 ENSMUSG00000103912 Gm33819 predicted gene, 33819 2.8074 0.0000
4 ENSMUSG00000110865 Gm47046 predicted gene, 47046 2.8074 0.0000
5 ENSMUSG00000042938 Gm14117 predicted gene 14117 2.6455 0.0000
6 ENSMUSG00000081439 Gm7840 predicted gene 7840 2.6055 0.0000
7 ENSMUSG00000060701 Fpr-rs3 Formyl peptide receptor-related sequence 3 2.5850 0.0000
8 ENSMUSG00000064477 Gm23404 predicted gene, 23404 2.5850 0.0001
9 ENSMUSG00000074284 Gm10658 NA 2.5850 0.0001
10 ENSMUSG00000075107 Olfr1216 NA 2.5850 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000036167 Pphln1 periphilin 1 -2.4737 0.0000
50997 ENSMUSG00000102615 Gm37844 predicted gene, 37844 -2.4684 0.0000
50996 ENSMUSG00000029817 Tra2a transformer 2 alpha -2.4633 0.0000
50995 ENSMUSG00000091288 Gm17075 predicted gene 17075 -2.4534 0.3545
50994 ENSMUSG00000089210 Gm23386 predicted gene, 23386 -2.4534 0.3754
50993 ENSMUSG00000110583 Gm7639 predicted gene 7639 -2.4451 0.0002
50992 ENSMUSG00000054450 Gm9945 NA -2.4430 0.0000
50991 ENSMUSG00000044352 Sowaha Ankyrin repeat domain-containing protein SOWAHA -2.4430 0.0000
50990 ENSMUSG00000097833 Gm5976 predicted gene 5976 -2.4299 0.0000
50989 ENSMUSG00000092812 Gm23634 predicted gene, 23634 -2.4221 0.0002

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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