SHOGoiN Cell Methylome: GSM1370524

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370524


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M3Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084326 Gm12820 predicted gene 12820 2.6598 0.0000
2 ENSMUSG00000091669 Gm17117 predicted gene 17117 2.5850 0.0000
3 ENSMUSG00000100476 Nanog-ps2 Nanog pseudogene 2 2.5850 0.0001
4 ENSMUSG00000108164 Gm43899 predicted gene, 43899 2.5850 0.0001
5 ENSMUSG00000111627 Gm48749 predicted gene, 48749 2.5850 0.0000
6 ENSMUSG00000112019 Gm48748 predicted gene, 48748 2.5850 0.0000
7 ENSMUSG00000104479 Gm10305 NA 2.5538 0.0000
8 ENSMUSG00000050299 Gm9843 NA 2.4642 0.0000
9 ENSMUSG00000080574 Mir466i microRNA 466i 2.4534 0.0000
10 ENSMUSG00000069421 Olfr810 NA 2.3978 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000045284 Dcaf12l1 DDB1- and CUL4-associated factor 12-like protein 1 -2.3146 0.0000
50997 ENSMUSG00000070695 Cntnap5a Contactin-associated protein like 5-1 -2.3023 0.0642
50996 ENSMUSG00000063615 Olfr64 NA -2.3023 0.0420
50995 ENSMUSG00000102030 Gm29106 NA -2.2970 0.0074
50994 ENSMUSG00000096732 Gm8897 NA -2.2925 0.6144
50993 ENSMUSG00000034265 Zdhhc14 zinc finger, DHHC domain containing 14 -2.2861 0.0000
50992 ENSMUSG00000025911 Adhfe1 Mus musculus alcohol dehydrogenase, iron containing, 1 (Adhfe1), transcript variant 2, mRNA. -2.2777 0.0000
50991 ENSMUSG00000111204 Gm47320 predicted gene, 47320 -2.2776 0.0000
50990 ENSMUSG00000026643 Nmt2 Glycylpeptide N-tetradecanoyltransferase 2 -2.2654 0.0000
50989 ENSMUSG00000085071 Gm14066 predicted gene 14066 -2.2340 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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