SHOGoiN Cell Methylome: GSM1370524

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370524


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6020500-761Sequence Read ArchiveSRP041257SRP041257_M3Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084326 Gm12820 predicted gene 12820 2.6598 0.0000
2 ENSMUSG00000091669 Gm17117 predicted gene 17117 2.5850 0.0000
3 ENSMUSG00000100476 Nanog-ps2 Nanog pseudogene 2 2.5850 0.0001
4 ENSMUSG00000108164 Gm43899 predicted gene, 43899 2.5850 0.0001
5 ENSMUSG00000111627 NA 2.5850 0.0000
6 ENSMUSG00000112019 NA 2.5850 0.0000
7 ENSMUSG00000104479 Gm10305 predicted gene 10305 2.5538 0.0000
8 ENSMUSG00000050299 Gm9843 predicted gene 9843 2.4642 0.0000
9 ENSMUSG00000080574 Mir466i microRNA 466i 2.4534 0.0000
10 ENSMUSG00000069421 Olfr810 olfactory receptor 810 2.3978 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100544 Gm28606 predicted gene 28606 -3.7004 0.2348
51075 ENSMUSG00000101111 Gm28437 predicted gene 28437 -3.6779 0.0000
51074 ENSMUSG00000100243 Gm28367 predicted gene 28367 -3.6439 0.1628
51073 ENSMUSG00000099416 Gm28540 predicted gene 28540 -3.6439 0.1628
51072 ENSMUSG00000101170 Gm29343 predicted gene 29343 -3.5850 0.3872
51071 ENSMUSG00000099355 Gm29342 predicted gene 29342 -3.5850 0.3872
51070 ENSMUSG00000100248 Gm28950 predicted gene 28950 -3.5236 0.2388
51069 ENSMUSG00000101204 Gm29271 predicted gene 29271 -3.4594 0.2370
51068 ENSMUSG00000101115 Gm28664 predicted gene 28664 -3.3923 0.3511
51067 ENSMUSG00000100849 Gm28663 predicted gene 28663 -3.3923 0.3511

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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