SHOGoiN Cell Methylome: GSM1370525

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370525


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M4Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104093 A330015K06Rik RIKEN cDNA A330015K06 gene 2.5850 0.0001
2 ENSMUSG00000105001 Gm47275 predicted gene, 47275 2.3555 0.0000
3 ENSMUSG00000083490 Gm14940 predicted gene 14940 2.3219 0.0005
4 ENSMUSG00000098085 Gm8919 predicted gene 8919 2.3219 0.0005
5 ENSMUSG00000100632 9430060I03Rik RIKEN cDNA 9430060I03 gene 2.3219 0.0000
6 ENSMUSG00000103706 6820402A03Rik RIKEN cDNA 6820402A03 gene 2.3219 0.0000
7 ENSMUSG00000031197 Vbp1 von Hippel-Lindau binding protein 1 2.1610 0.0000
8 ENSMUSG00000106058 Gm43013 predicted gene 43013 2.0047 0.0000
9 ENSMUSG00000025939 Ube2w ubiquitin-conjugating enzyme E2W (putative) 2.0000 0.0000
10 ENSMUSG00000034732 Pabpc5 poly(A) binding protein cytoplasmic 5 2.0000 0.0034

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000100787 Gm28316 predicted gene 28316 -2.0000 1.0000
50997 ENSMUSG00000099835 Gm29668 predicted gene 29668 -2.0000 1.0000
50996 ENSMUSG00000099416 Gm28540 predicted gene 28540 -2.0000 1.0000
50995 ENSMUSG00000096172 Gm22992 predicted gene, 22992 -2.0000 1.0000
50994 ENSMUSG00000096133 Gm25145 predicted gene, 25145 -2.0000 1.0000
50993 ENSMUSG00000094939 Gm21773 NA -2.0000 1.0000
50992 ENSMUSG00000094843 Ppp1r2-ps1 protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 1 -2.0000 0.3723
50991 ENSMUSG00000089546 Gm25839 predicted gene, 25839 -2.0000 1.0000
50990 ENSMUSG00000088394 Gm26312 predicted gene, 26312 -2.0000 0.6156
50989 ENSMUSG00000085280 Gm16151 predicted gene 16151 -2.0000 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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