SHOGoiN Cell Methylome: GSM1370525

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370525


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M4Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104093 A330015K06Rik RIKEN cDNA A330015K06 gene 2.5850 0.0001
2 ENSMUSG00000105001 NA 2.3555 0.0000
3 ENSMUSG00000083490 Gm14940 predicted gene 14940 2.3219 0.0005
4 ENSMUSG00000098085 Gm8919 predicted gene 8919 2.3219 0.0005
5 ENSMUSG00000100632 9430060I03Rik RIKEN cDNA 9430060I03 gene 2.3219 0.0000
6 ENSMUSG00000103706 6820402A03Rik RIKEN cDNA 6820402A03 gene 2.3219 0.0000
7 ENSMUSG00000031197 Vbp1 von Hippel-Lindau binding protein 1 2.1610 0.0000
8 ENSMUSG00000106058 Gm43013 predicted gene 43013 2.0047 0.0000
9 ENSMUSG00000025939 Ube2w ubiquitin-conjugating enzyme E2W (putative) 2.0000 0.0000
10 ENSMUSG00000034732 Pabpc5 poly(A) binding protein, cytoplasmic 5 2.0000 0.0034

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000089705 Gm15970 predicted gene 15970 -2.6610 0.0606
51075 ENSMUSG00000083076 Gm11408 predicted gene 11408 -2.6024 0.0000
51074 ENSMUSG00000102195 Gm38168 predicted gene, 38168 -2.5850 1.0000
51073 ENSMUSG00000102016 Gm29606 predicted gene 29606 -2.5850 1.0000
51072 ENSMUSG00000101440 Gm29425 predicted gene 29425 -2.5850 1.0000
51071 ENSMUSG00000101245 Gm28965 predicted gene 28965 -2.5850 1.0000
51070 ENSMUSG00000101170 Gm29343 predicted gene 29343 -2.5850 1.0000
51069 ENSMUSG00000100887 Gm29297 predicted gene 29297 -2.5850 1.0000
51068 ENSMUSG00000100682 Gm28103 predicted gene 28103 -2.5850 1.0000
51067 ENSMUSG00000100584 Gm28733 predicted gene 28733 -2.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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