SHOGoiN Cell Methylome: GSM1370526

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370526


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M5Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000052562 Slc22a30 solute carrier family 22, member 30 2.5850 0.0002
2 ENSMUSG00000064958 Gm24921 predicted gene, 24921 2.5850 0.0000
3 ENSMUSG00000093796 Rps12-ps23 ribosomal protein S12, pseudogene 23 2.5850 0.0002
4 ENSMUSG00000012429 Mplkip M-phase specific PLK1 intereacting protein 2.4534 0.0000
5 ENSMUSG00000055137 Sugct Succinate--hydroxymethylglutarate CoA-transferase 2.4534 0.0000
6 ENSMUSG00000021390 Ogn osteoglycin 2.3219 0.0012
7 ENSMUSG00000083777 Gm13361 predicted gene 13361 2.3219 0.0000
8 ENSMUSG00000084303 Gm8216 predicted gene 8216 2.3219 0.0012
9 ENSMUSG00000098174 Gm8183 predicted gene 8183 2.3219 0.0012
10 ENSMUSG00000104040 Gm37563 predicted gene, 37563 2.3219 0.0012

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000095702 Gm15005 predicted gene 15005 -2.0000 1.0000
50997 ENSMUSG00000095693 Gm21820 NA -2.0000 1.0000
50996 ENSMUSG00000095445 H2al1i Histone H2A-like 1 -2.0000 0.2248
50995 ENSMUSG00000094471 Gm25937 predicted gene, 25937 -2.0000 1.0000
50994 ENSMUSG00000094188 Gm22621 predicted gene, 22621 -2.0000 1.0000
50993 ENSMUSG00000093970 Gm23358 predicted gene, 23358 -2.0000 1.0000
50992 ENSMUSG00000093776 Vmn2r-ps120 vomeronasal 2, receptor, pseudogene 120 -2.0000 1.0000
50991 ENSMUSG00000087462 Gm2200 predicted gene 2200 -2.0000 1.0000
50990 ENSMUSG00000087061 A130030D18Rik RIKEN cDNA A130030D18 gene -2.0000 1.0000
50989 ENSMUSG00000085209 Gm12637 predicted gene 12637 -2.0000 0.6014

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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