SHOGoiN Cell Methylome: GSM1370526

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370526


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M5Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000052562 Slc22a30 solute carrier family 22, member 30 2.5850 0.0002
2 ENSMUSG00000064958 Gm24921 predicted gene, 24921 2.5850 0.0000
3 ENSMUSG00000093796 Rps12-ps23 ribosomal protein S12, pseudogene 23 2.5850 0.0002
4 ENSMUSG00000012429 Mplkip M-phase specific PLK1 intereacting protein 2.4534 0.0000
5 ENSMUSG00000055137 Sugct succinyl-CoA glutarate-CoA transferase 2.4534 0.0000
6 ENSMUSG00000021390 Ogn osteoglycin 2.3219 0.0012
7 ENSMUSG00000083777 Gm13361 predicted gene 13361 2.3219 0.0000
8 ENSMUSG00000084303 Gm8216 predicted gene 8216 2.3219 0.0012
9 ENSMUSG00000098174 Gm8183 predicted gene 8183 2.3219 0.0012
10 ENSMUSG00000104040 Gm37563 predicted gene, 37563 2.3219 0.0012

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000090326 Dthd1 death domain containing 1 -2.9069 0.3319
51075 ENSMUSG00000097971 Gm26917 predicted gene, 26917 -2.8657 0.0000
51074 ENSMUSG00000101931 Gm28108 predicted gene 28108 -2.8074 0.6014
51073 ENSMUSG00000101804 Gm28813 predicted gene 28813 -2.8074 0.6014
51072 ENSMUSG00000100584 Gm28733 predicted gene 28733 -2.8074 0.4904
51071 ENSMUSG00000100140 Gm28789 predicted gene 28789 -2.8074 0.6014
51070 ENSMUSG00000100035 Gm29473 predicted gene 29473 -2.8074 0.6014
51069 ENSMUSG00000099480 Gm28124 predicted gene 28124 -2.8074 0.6014
51068 ENSMUSG00000086986 Gm12103 predicted gene 12103 -2.8074 0.6014
51067 ENSMUSG00000110515 Gm9644 predicted gene 9644 -2.7518 0.0140

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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