SHOGoiN Cell Methylome: GSM1370527

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370527


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M6Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000086244 4930558G05Rik RIKEN cDNA 4930558G05 gene 2.5850 0.0001
2 ENSMUSG00000095097 Gm23658 predicted gene, 23658 2.5850 0.0000
3 ENSMUSG00000096386 Vmn1r100 vomeronasal 1 receptor 100 2.5850 0.0001
4 ENSMUSG00000104890 Mir3084-1 microRNA 3084-1 2.5850 0.0000
5 ENSMUSG00000052217 Hbb-bh1 hemoglobin Z, beta-like embryonic chain 2.3219 0.0005
6 ENSMUSG00000078621 Hbb-bh2 NA 2.3219 0.0005
7 ENSMUSG00000081033 Gm14797 predicted gene 14797 2.3219 0.0005
8 ENSMUSG00000085481 Gm16304 predicted gene 16304 2.3219 0.0000
9 ENSMUSG00000099960 Gm28590 predicted gene 28590 2.3219 0.0005
10 ENSMUSG00000102925 Gm37150 predicted gene, 37150 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000077338 Gm23294 predicted gene, 23294 -2.3143 0.0395
50997 ENSMUSG00000097059 Fam120aos family with sequence similarity 120A, opposite strand -2.3048 0.0000
50996 ENSMUSG00000099785 Gm28425 predicted gene 28425 -2.2925 0.2356
50995 ENSMUSG00000049217 Olfr788 olfactory receptor family 6 subfamily C member 3 -2.2925 0.1519
50994 ENSMUSG00000048378 Olfr1394 NA -2.2560 0.0019
50993 ENSMUSG00000076258 Gm23935 predicted gene, 23935 -2.2527 0.0000
50992 ENSMUSG00000111830 4930568E12Rik RIKEN cDNA 4930568E12 gene -2.2507 0.0397
50991 ENSMUSG00000111285 Gm47051 predicted gene, 47051 -2.2507 0.0397
50990 ENSMUSG00000102101 Zbtb11os1 zinc finger and BTB domain containing 11, opposite strand 1 -2.2433 0.0000
50989 ENSMUSG00000100685 Gm28610 predicted gene 28610 -2.2370 0.0029

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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