SHOGoiN Cell Methylome: GSM1370527

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370527


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6020500-761Sequence Read ArchiveSRP041257SRP041257_M6Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000086244 4930558G05Rik RIKEN cDNA 4930558G05 gene 2.5850 0.0001
2 ENSMUSG00000095097 Gm23658 predicted gene, 23658 2.5850 0.0000
3 ENSMUSG00000096386 Vmn1r100 vomeronasal 1 receptor 100 2.5850 0.0001
4 ENSMUSG00000104890 Mir3084-1 microRNA 3084-1 2.5850 0.0000
5 ENSMUSG00000052217 Hbb-bh1 hemoglobin Z, beta-like embryonic chain 2.3219 0.0005
6 ENSMUSG00000078621 Hbb-bh2 hemoglobin beta, bh2 2.3219 0.0005
7 ENSMUSG00000081033 Gm14797 predicted gene 14797 2.3219 0.0005
8 ENSMUSG00000085481 Gm16304 predicted gene 16304 2.3219 0.0000
9 ENSMUSG00000099960 Gm28590 predicted gene 28590 2.3219 0.0005
10 ENSMUSG00000102925 Gm37150 predicted gene, 37150 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100054 Gm28202 predicted gene 28202 -3.1699 0.6130
51075 ENSMUSG00000094911 Gm21921 predicted gene, 21921 -3.1699 0.6130
51074 ENSMUSG00000090326 Dthd1 death domain containing 1 -3.1699 0.5009
51073 ENSMUSG00000106106 NA -3.1670 0.0000
51072 ENSMUSG00000100887 Gm29297 predicted gene 29297 -3.0875 0.4960
51071 ENSMUSG00000086052 Gm11802 predicted gene 11802 -3.0875 0.4960
51070 ENSMUSG00000097971 Gm26917 predicted gene, 26917 -3.0061 0.0000
51069 ENSMUSG00000103936 Gm36965 predicted gene, 36965 -3.0000 0.6035
51068 ENSMUSG00000101782 Gm28964 predicted gene 28964 -3.0000 0.6035
51067 ENSMUSG00000101512 Gm28135 predicted gene 28135 -3.0000 0.6035

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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