SHOGoiN Cell Methylome: GSM1370528

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370528


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6020500-761Sequence Read ArchiveSRP041257SRP041257_M7Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000004542 Psg19 pregnancy specific glycoprotein 19 2.0000 0.0032
2 ENSMUSG00000049882 Vcpkmt valosin containing protein lysine (K) methyltransferase 2.0000 0.0032
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.0000 0.0032
4 ENSMUSG00000088184 Gm23137 predicted gene, 23137 2.0000 0.0032
5 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 2.0000 0.0032
6 ENSMUSG00000096499 Ighv1-5 immunoglobulin heavy variable V1-5 2.0000 0.0000
7 ENSMUSG00000098357 Mir7094-2 microRNA 7094-2 2.0000 0.0000
8 ENSMUSG00000098943 Rnu3b1 U3B small nuclear RNA 1 2.0000 0.0032
9 ENSMUSG00000099611 Vmn1r189 vomeronasal 1 receptor 189 2.0000 0.0032
10 ENSMUSG00000105025 Rnu3b1 U3B small nuclear RNA 1 2.0000 0.0032

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100140 Gm28789 predicted gene 28789 -2.5850 1.0000
51075 ENSMUSG00000099962 Gm28613 predicted gene 28613 -2.5850 1.0000
51074 ENSMUSG00000099520 Gm29061 predicted gene 29061 -2.5850 1.0000
51073 ENSMUSG00000099071 Mir8095 microRNA 8095 -2.5850 1.0000
51072 ENSMUSG00000097693 4930471M09Rik RIKEN cDNA 4930471M09 gene -2.5850 1.0000
51071 ENSMUSG00000096885 Gm21797 predicted gene, 21797 -2.5850 1.0000
51070 ENSMUSG00000095305 Gm23790 predicted gene, 23790 -2.5850 1.0000
51069 ENSMUSG00000093975 Vmn2r-ps19 vomeronasal 2, receptor, pseudogene 19 -2.5850 1.0000
51068 ENSMUSG00000089609 Gm22095 predicted gene, 22095 -2.5850 1.0000
51067 ENSMUSG00000087872 Gm26098 predicted gene, 26098 -2.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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