SHOGoiN Cell Methylome: GSM1370528

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370528


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M7Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000004542 Psg19 pregnancy specific glycoprotein 19 2.0000 0.0032
2 ENSMUSG00000049882 Vcpkmt valosin containing protein lysine (K) methyltransferase 2.0000 0.0032
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.0000 0.0032
4 ENSMUSG00000088184 Gm23137 predicted gene, 23137 2.0000 0.0032
5 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 2.0000 0.0032
6 ENSMUSG00000096499 Ighv1-5 NA 2.0000 0.0000
7 ENSMUSG00000098357 Mir7094-2 microRNA 7094-2 2.0000 0.0000
8 ENSMUSG00000098943 Rnu3b1 U3B small nuclear RNA 1 2.0000 0.0032
9 ENSMUSG00000099611 Vmn1r189 vomeronasal 1 receptor 189 2.0000 0.0032
10 ENSMUSG00000105025 Rnu3b1 U3B small nuclear RNA 1 2.0000 0.0032

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000101804 Gm28813 predicted gene 28813 -2.0000 1.0000
50997 ENSMUSG00000101512 Gm28135 predicted gene 28135 -2.0000 1.0000
50996 ENSMUSG00000101440 Gm29425 predicted gene 29425 -2.0000 1.0000
50995 ENSMUSG00000100938 Gm28726 predicted gene 28726 -2.0000 1.0000
50994 ENSMUSG00000100440 Gm28405 predicted gene 28405 -2.0000 1.0000
50993 ENSMUSG00000100227 Gm28291 predicted gene 28291 -2.0000 1.0000
50992 ENSMUSG00000100126 Gm29584 predicted gene 29584 -2.0000 1.0000
50991 ENSMUSG00000099785 Gm28425 predicted gene 28425 -2.0000 1.0000
50990 ENSMUSG00000099554 Gm28259 predicted gene 28259 -2.0000 1.0000
50989 ENSMUSG00000099494 Gm28197 predicted gene 28197 -2.0000 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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