SHOGoiN Cell Methylome: GSM1370529

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370529


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M8Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.7004 0.0000
2 ENSMUSG00000101031 Ms4a12 membrane spanning 4-domains A12 2.5850 0.0001
3 ENSMUSG00000084706 Gm22987 predicted gene, 22987 2.5184 0.0000
4 ENSMUSG00000109354 Olfr706 NA 2.3502 0.0000
5 ENSMUSG00000085856 Gm12050 predicted gene 12050 2.3219 0.0005
6 ENSMUSG00000081283 Vmn1r-ps104 vomeronasal 1 receptor, pseudogene 104 2.3023 0.0000
7 ENSMUSG00000064208 Gm10145 predicted gene 10145 2.1073 0.0000
8 ENSMUSG00000089987 Gpx2-ps1 glutathione peroxidase 2, pseudogene 1 2.0878 0.0000
9 ENSMUSG00000101014 Gm28289 predicted gene 28289 2.0060 0.0000
10 ENSMUSG00000060701 Fpr-rs3 Formyl peptide receptor-related sequence 3 2.0000 0.0032

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000060284 Sp7 Mus musculus Sp7 transcription factor 7 (Sp7), transcript variant 2, mRNA. -2.2160 0.0044
50997 ENSMUSG00000089705 Gm15970 predicted gene 15970 -2.2018 0.0352
50996 ENSMUSG00000091040 Gm9359 predicted gene 9359 -2.1950 0.0418
50995 ENSMUSG00000101931 Gm28108 predicted gene 28108 -2.1699 1.0000
50994 ENSMUSG00000085169 Gm10785 NA -2.1089 0.0000
50993 ENSMUSG00000076258 Gm23935 predicted gene, 23935 -2.0909 0.0000
50992 ENSMUSG00000099940 Gm29265 predicted gene 29265 -2.0850 0.3733
50991 ENSMUSG00000064536 Gm23615 predicted gene, 23615 -2.0850 0.3733
50990 ENSMUSG00000100945 Gm29529 predicted gene 29529 -2.0575 0.1598
50989 ENSMUSG00000030069 Prok2 prokineticin 2 -2.0237 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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