SHOGoiN Cell Methylome: GSM1370529

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370529


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6020500-761Sequence Read ArchiveSRP041257SRP041257_M8Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.7004 0.0000
2 ENSMUSG00000101031 Ms4a12 membrane-spanning 4-domains, subfamily A, member 12 2.5850 0.0001
3 ENSMUSG00000084706 Gm22987 predicted gene, 22987 2.5184 0.0000
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.3502 0.0000
5 ENSMUSG00000085856 Gm12050 predicted gene 12050 2.3219 0.0005
6 ENSMUSG00000081283 Vmn1r-ps104 vomeronasal 1 receptor, pseudogene 104 2.3023 0.0000
7 ENSMUSG00000064208 Gm10145 predicted gene 10145 2.1073 0.0000
8 ENSMUSG00000089987 Gpx2-ps1 glutathione peroxidase 2, pseudogene 1 2.0878 0.0000
9 ENSMUSG00000101014 Gm28289 predicted gene 28289 2.0060 0.0000
10 ENSMUSG00000060701 Fpr-rs3 formyl peptide receptor, related sequence 3 2.0000 0.0032

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000098604 Gm27295 predicted gene, 27295 -3.1699 0.6140
51075 ENSMUSG00000073878 Gm13304 predicted gene 13304 -3.1699 0.6140
51074 ENSMUSG00000061602 Vmn1r78 vomeronasal 1 receptor 78 -3.1699 0.6140
51073 ENSMUSG00000108809 Gm45228 predicted gene 45228 -3.0875 0.1386
51072 ENSMUSG00000092999 Gm23921 predicted gene, 23921 -3.0875 0.1386
51071 ENSMUSG00000104674 Gm42756 predicted gene 42756 -3.0000 0.6037
51070 ENSMUSG00000104572 Fbxw23 F-box and WD-40 domain protein 23 -3.0000 0.6037
51069 ENSMUSG00000101533 Gm29393 predicted gene 29393 -3.0000 0.6037
51068 ENSMUSG00000100915 Gm29321 predicted gene 29321 -3.0000 0.6037
51067 ENSMUSG00000100887 Gm29297 predicted gene 29297 -3.0000 0.4946

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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