SHOGoiN Cell Methylome: GSM1370531

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370531


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M10Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109100 Olfr1464-ps1 olfactory receptor 1464, pseudogene 1 2.5850 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 2.4534 0.0000
3 ENSMUSG00000025666 Tmem47 transmembrane protein 47 2.3219 0.0005
4 ENSMUSG00000084899 Gm15344 predicted gene 15344 2.3219 0.0005
5 ENSMUSG00000087224 Gm2182 predicted gene 2182 2.3219 0.0005
6 ENSMUSG00000091283 Gm17234 predicted gene 17234 2.3219 0.0000
7 ENSMUSG00000096535 Gm24755 predicted gene, 24755 2.3219 0.0005
8 ENSMUSG00000102525 Gm37784 predicted gene, 37784 2.3219 0.0005
9 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0005
10 ENSMUSG00000082687 Gm11474 predicted gene 11474 2.2154 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000101456 Gm29043 predicted gene 29043 -3.7004 0.2352
51075 ENSMUSG00000100544 Gm28606 predicted gene 28606 -3.7004 0.2352
51074 ENSMUSG00000100452 Gm29628 predicted gene 29628 -3.7004 0.2352
51073 ENSMUSG00000099548 Gm29220 predicted gene 29220 -3.7004 0.2352
51072 ENSMUSG00000091288 Gm17075 predicted gene 17075 -3.7004 0.2352
51071 ENSMUSG00000057855 Krtap6-3 keratin associated protein 6-3 -3.7004 0.2352
51070 ENSMUSG00000110203 Gm45365 predicted gene 45365 -3.5850 0.3861
51069 ENSMUSG00000101282 Gm28152 predicted gene 28152 -3.5850 0.3861
51068 ENSMUSG00000100809 Gm28612 predicted gene 28612 -3.5850 0.3861
51067 ENSMUSG00000099962 Gm28613 predicted gene 28613 -3.5850 0.3861

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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