SHOGoiN Cell Methylome: GSM1370531

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370531


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M10Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109100 Olfr1464-ps1 olfactory receptor 1464, pseudogene 1 2.5850 0.0000
2 ENSMUSG00000040370 Etfrf1 Electron transfer flavoprotein regulatory factor 1 2.4534 0.0000
3 ENSMUSG00000025666 Tmem47 Transmembrane protein 47 2.3219 0.0005
4 ENSMUSG00000084899 Gm15344 predicted gene 15344 2.3219 0.0005
5 ENSMUSG00000087224 Gm2182 predicted gene 2182 2.3219 0.0005
6 ENSMUSG00000091283 Gm17234 predicted gene 17234 2.3219 0.0000
7 ENSMUSG00000096535 Gm24755 predicted gene, 24755 2.3219 0.0005
8 ENSMUSG00000102525 Gm37784 predicted gene, 37784 2.3219 0.0005
9 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0005
10 ENSMUSG00000082687 Gm11474 predicted gene 11474 2.2154 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000109946 Brd3os bromodomain containing 3, opposite strand -2.5437 0.1592
50997 ENSMUSG00000076258 Gm23935 predicted gene, 23935 -2.5041 0.0000
50996 ENSMUSG00000100887 Gm29297 predicted gene 29297 -2.5025 1.0000
50995 ENSMUSG00000099699 Gm29421 predicted gene 29421 -2.5000 0.3760
50994 ENSMUSG00000085838 Chn1os1 chimerin 1, opposite strand 1 -2.5000 0.1522
50993 ENSMUSG00000083863 Gm13341 predicted gene 13341 -2.4828 0.0000
50992 ENSMUSG00000099921 Gm28971 predicted gene 28971 -2.4594 1.0000
50991 ENSMUSG00000093581 Gm18006 predicted gene, 18006 -2.4534 0.0073
50990 ENSMUSG00000047592 Nxpe5 NA -2.3903 0.0002
50989 ENSMUSG00000089043 Gm24359 predicted gene, 24359 -2.3502 0.2380

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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