SHOGoiN Cell Methylome: GSM1370532

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370532


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M11Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.4919 0.0000
2 ENSMUSG00000053678 Defb40 defensin beta 40 3.3219 0.0000
3 ENSMUSG00000022962 Gart phosphoribosylglycinamide formyltransferase 2.8074 0.0000
4 ENSMUSG00000002308 Cd320 CD320 antigen 2.5850 0.0001
5 ENSMUSG00000086020 Gm12239 predicted gene 12239 2.5850 0.0001
6 ENSMUSG00000104335 Gm38281 predicted gene, 38281 2.5850 0.0001
7 ENSMUSG00000084301 Gm7856 predicted gene 7856 2.3219 0.0000
8 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.3219 0.0006
9 ENSMUSG00000099741 Gm5253 predicted gene 5253 2.3219 0.0006
10 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0006

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000075379 Olfr358 olfactory receptor 358 -3.7004 0.2343
51075 ENSMUSG00000096885 Gm21797 predicted gene, 21797 -3.6439 0.1643
51074 ENSMUSG00000101961 Gm28220 predicted gene 28220 -3.5850 0.2324
51073 ENSMUSG00000101949 Gm5370 predicted gene 5370 -3.5850 0.2324
51072 ENSMUSG00000101539 Gm28252 predicted gene 28252 -3.5850 0.2324
51071 ENSMUSG00000100499 Gm28460 predicted gene 28460 -3.5850 0.2324
51070 ENSMUSG00000100452 Gm29628 predicted gene 29628 -3.5850 0.2324
51069 ENSMUSG00000100248 Gm28950 predicted gene 28950 -3.5850 0.2324
51068 ENSMUSG00000099416 Gm28540 predicted gene 28540 -3.5850 0.2324
51067 ENSMUSG00000101278 Gm29381 predicted gene 29381 -3.5236 0.1609

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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