SHOGoiN Cell Methylome: GSM1370532

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370532


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M11Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.4919 0.0000
2 ENSMUSG00000053678 Defb40 NA 3.3219 0.0000
3 ENSMUSG00000022962 Gart Mus musculus phosphoribosylglycinamide formyltransferase (Gart), transcript variant 2, mRNA. 2.8074 0.0000
4 ENSMUSG00000002308 Cd320 CD320 antigen 2.5850 0.0001
5 ENSMUSG00000086020 Gm12239 predicted gene 12239 2.5850 0.0001
6 ENSMUSG00000104335 Gm38281 predicted gene, 38281 2.5850 0.0001
7 ENSMUSG00000084301 Gm7856 predicted gene 7856 2.3219 0.0000
8 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.3219 0.0006
9 ENSMUSG00000099741 Gm5253 predicted gene 5253 2.3219 0.0006
10 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0006

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000107647 Gm44445 predicted gene, 44445 -2.5000 0.4920
50997 ENSMUSG00000056270 Prr9 Proline-rich protein 9 -2.4810 0.0107
50996 ENSMUSG00000105361 AY036118 cDNA sequence AY036118 -2.4744 0.0000
50995 ENSMUSG00000076258 Gm23935 predicted gene, 23935 -2.4560 0.0000
50994 ENSMUSG00000077295 Gm24122 predicted gene, 24122 -2.4534 0.1501
50993 ENSMUSG00000019796 Lrp11 Low-density lipoprotein receptor-related protein 11 -2.4534 0.2324
50992 ENSMUSG00000100884 Gm28281 predicted gene 28281 -2.4450 0.0044
50991 ENSMUSG00000032336 Nptn Neuroplastin -2.4096 0.0157
50990 ENSMUSG00000106106 NA -2.3963 0.0000
50989 ENSMUSG00000097971 Gm26917 predicted gene, 26917 -2.3952 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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