SHOGoiN Cell Methylome: GSM1370533

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370533


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M12Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 NA 4.8074 0.0000
2 ENSMUSG00000105566 Obox4-ps4 oocyte specific homeobox 4, pseudogene 4 3.0000 0.0000
3 ENSMUSG00000052471 Gm9881 NA 2.9251 0.0000
4 ENSMUSG00000103509 Gm38372 predicted gene, 38372 2.6340 0.0000
5 ENSMUSG00000107745 Gm43917 predicted gene, 43917 2.5850 0.0000
6 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.4594 0.0000
7 ENSMUSG00000088654 Gm24850 predicted gene, 24850 2.3900 0.0000
8 ENSMUSG00000081531 Vmn1r-ps113 vomeronasal 1 receptor, pseudogene 113 2.3219 0.0006
9 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 2.3219 0.0006
10 ENSMUSG00000110047 A230085B16Rik RIKEN cDNA A230085B16 gene 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000087318 Gm12114 predicted gene 12114 -1.7982 0.0162
50997 ENSMUSG00000076944 Gm22064 predicted gene, 22064 -1.7979 0.0960
50996 ENSMUSG00000065047 Gm24045 predicted gene, 24045 -1.7968 0.0000
50995 ENSMUSG00000112301 Gm10752 NA -1.7957 0.0000
50994 ENSMUSG00000068391 Chrac1 Chromatin accessibility complex protein 1 -1.7956 0.0001
50993 ENSMUSG00000087178 A230056P14Rik RIKEN cDNA A230056P14 gene -1.7944 0.0008
50992 ENSMUSG00000108921 Gm4083 predicted gene 4083 -1.7925 1.0000
50991 ENSMUSG00000108089 Gm3148 predicted gene 3148 -1.7925 0.3779
50990 ENSMUSG00000107022 Gm36669 predicted gene, 36669 -1.7925 1.0000
50989 ENSMUSG00000105314 Ranbp2-ps11 RAN binding protein 2, pseudogene 11 -1.7925 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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