SHOGoiN Cell Methylome: GSM1370533

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370533


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M12Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.8074 0.0000
2 ENSMUSG00000105566 Obox4-ps4 oocyte specific homeobox 4, pseudogene 4 3.0000 0.0000
3 ENSMUSG00000052471 Gm9881 predicted gene 9881 2.9251 0.0000
4 ENSMUSG00000103509 Gm38372 predicted gene, 38372 2.6340 0.0000
5 ENSMUSG00000107745 Gm43917 predicted gene, 43917 2.5850 0.0000
6 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.4594 0.0000
7 ENSMUSG00000088654 Gm24850 predicted gene, 24850 2.3900 0.0000
8 ENSMUSG00000081531 Vmn1r-ps113 vomeronasal 1 receptor, pseudogene 113 2.3219 0.0006
9 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 2.3219 0.0006
10 ENSMUSG00000110047 A230085B16Rik RIKEN cDNA A230085B16 gene 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000075208 Olfr1019 olfactory receptor 1019 -2.0000 0.5997
51075 ENSMUSG00000073103 Gm10466 predicted gene 10466 -2.0000 1.0000
51074 ENSMUSG00000073010 Gm5127 predicted gene 5127 -2.0000 1.0000
51073 ENSMUSG00000067971 Olfr1321 olfactory receptor 1321 -2.0000 0.5997
51072 ENSMUSG00000064553 Gm24622 predicted gene, 24622 -2.0000 1.0000
51071 ENSMUSG00000060017 Olfr121 olfactory receptor 121 -2.0000 1.0000
51070 ENSMUSG00000057726 Serpinb9g serine (or cysteine) peptidase inhibitor, clade B, member 9g -2.0000 1.0000
51069 ENSMUSG00000048391 Olfr843 olfactory receptor 843 -2.0000 1.0000
51068 ENSMUSG00000046975 Olfr1020 olfactory receptor 1020 -2.0000 0.5997
51067 ENSMUSG00000044125 9530080O11Rik RIKEN cDNA 9530080O11 gene -2.0000 0.0001

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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