SHOGoiN Cell Methylome: GSM1370535

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370535


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M13Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.3576 0.0000
2 ENSMUSG00000112452 NA 3.9069 0.0000
3 ENSMUSG00000104688 Gm18702 predicted gene, 18702 2.5850 0.0017
4 ENSMUSG00000066030 Oog2 oogenesin 2 2.3219 0.0062
5 ENSMUSG00000108070 Gm43872 predicted gene, 43872 2.3219 0.0062
6 ENSMUSG00000112691 NA 2.2146 0.0000
7 ENSMUSG00000067186 Olfr132 olfactory receptor 132 2.0984 0.0000
8 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.0850 0.0000
9 ENSMUSG00000016529 Il10 interleukin 10 2.0000 0.0222
10 ENSMUSG00000022061 Nkx3-1 NK-3 transcription factor, locus 1 (Drosophila) 2.0000 0.0005

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100852 Gm29056 predicted gene 29056 -3.5850 0.0415
51075 ENSMUSG00000100805 Gm29108 predicted gene 29108 -3.5850 0.0415
51074 ENSMUSG00000103832 Gm37611 predicted gene, 37611 -3.4594 0.0717
51073 ENSMUSG00000101785 Gm28702 predicted gene 28702 -3.4594 0.0717
51072 ENSMUSG00000100809 Gm28612 predicted gene 28612 -3.4594 0.0148
51071 ENSMUSG00000100544 Gm28606 predicted gene 28606 -3.4594 0.0717
51070 ENSMUSG00000100532 Gm28225 predicted gene 28225 -3.4594 0.0717
51069 ENSMUSG00000100149 Gm28701 predicted gene 28701 -3.4594 0.0717
51068 ENSMUSG00000099962 Gm28613 predicted gene 28613 -3.4594 0.0148
51067 ENSMUSG00000044994 Olfr1426 olfactory receptor 1426 -3.4594 0.0717

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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