SHOGoiN Cell Methylome: GSM1370538

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370538


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M16Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 5.4919 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 5.2479 0.0000
3 ENSMUSG00000102836 Gm37013 predicted gene, 37013 3.8074 0.0000
4 ENSMUSG00000103125 Gm37388 predicted gene, 37388 3.8074 0.0000
5 ENSMUSG00000103384 Gm37753 predicted gene, 37753 3.8074 0.0000
6 ENSMUSG00000103707 Pcdha6 protocadherin alpha 6 3.8074 0.0000
7 ENSMUSG00000104318 Pcdha7 protocadherin alpha 7 3.8074 0.0000
8 ENSMUSG00000047419 Cmya5 cardiomyopathy associated 5 3.3219 0.0000
9 ENSMUSG00000064570 Gm25800 predicted gene, 25800 3.0000 0.0000
10 ENSMUSG00000083668 Gm5648 predicted pseudogene 5648 2.8074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000101962 Gm28741 predicted gene 28741 -3.4594 0.1305
51075 ENSMUSG00000101440 Gm29425 predicted gene 29425 -3.4594 0.0416
51074 ENSMUSG00000099723 Gm28595 predicted gene 28595 -3.4594 0.1305
51073 ENSMUSG00000098178 Gm42418 predicted gene, 42418 -3.3938 0.0000
51072 ENSMUSG00000102835 Gm37572 predicted gene, 37572 -3.3923 0.0637
51071 ENSMUSG00000102255 Gm36891 predicted gene, 36891 -3.3923 0.0637
51070 ENSMUSG00000101627 Gm28432 predicted gene 28432 -3.3923 0.0637
51069 ENSMUSG00000100915 Gm29321 predicted gene 29321 -3.3923 0.0637
51068 ENSMUSG00000100805 Gm29108 predicted gene 29108 -3.3923 0.0637
51067 ENSMUSG00000099548 Gm29220 predicted gene 29220 -3.3923 0.0637

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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