SHOGoiN Cell Methylome: GSM1370541

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370541


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M19Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.7004 0.0000
2 ENSMUSG00000109354 Olfr706 NA 4.5236 0.0000
3 ENSMUSG00000100580 4933436I20Rik RIKEN cDNA 4933436I20 gene 3.4594 0.0000
4 ENSMUSG00000111180 Gm39348 predicted gene, 39348 3.1699 0.0000
5 ENSMUSG00000103384 Gm37753 predicted gene, 37753 2.5850 0.0000
6 ENSMUSG00000103707 Pcdha6 NA 2.5850 0.0000
7 ENSMUSG00000083425 Gm13992 predicted gene 13992 2.3219 0.0075
8 ENSMUSG00000097754 Ptgs2os2 prostaglandin-endoperoxide synthase 2, opposite strand 2 2.3219 0.0075
9 ENSMUSG00000097927 Gm6999 predicted gene 6999 2.3219 0.0075
10 ENSMUSG00000106712 Gm19649 predicted gene, 19649 2.3219 0.0075

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000080757 Gm15029 predicted gene 15029 -2.4534 0.0085
50997 ENSMUSG00000049460 Gm8396 predicted gene 8396 -2.4037 0.0148
50996 ENSMUSG00000094354 Gm21882 NA -2.3685 0.0001
50995 ENSMUSG00000068151 A230006K03Rik RIKEN cDNA A230006K03 gene -2.3589 0.0148
50994 ENSMUSG00000036285 Noa1 Nitric oxide-associated protein 1 -2.3587 0.0000
50993 ENSMUSG00000112468 Gm47720 predicted gene, 47720 -2.3219 0.3272
50992 ENSMUSG00000101967 Gm29555 predicted gene 29555 -2.3219 0.3272
50991 ENSMUSG00000101134 Gm28482 predicted gene 28482 -2.3219 0.3272
50990 ENSMUSG00000101124 Gm28371 predicted gene 28371 -2.3219 0.3272
50989 ENSMUSG00000100694 Gm29182 predicted gene 29182 -2.3219 0.3272

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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