SHOGoiN Cell Methylome: GSM1370543

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370543


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M21Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109539 Gm44667 predicted gene 44667 3.7004 0.0000
2 ENSMUSG00000104318 Pcdha7 protocadherin alpha 7 3.4594 0.0000
3 ENSMUSG00000101818 Gm28269 predicted gene 28269 3.1699 0.0000
4 ENSMUSG00000098114 Gm26957 predicted gene, 26957 3.0000 0.0000
5 ENSMUSG00000071753 C230004F18Rik RIKEN cDNA C230004F18 gene 2.3219 0.0027
6 ENSMUSG00000108512 Gm7238 predicted gene 7238 2.3219 0.0027
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 2.0000 0.0119
8 ENSMUSG00000047728 BC025446 cDNA sequence BC025446 2.0000 0.0119
9 ENSMUSG00000054640 Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 2.0000 0.0119
10 ENSMUSG00000081577 Gm13455 predicted gene 13455 2.0000 0.0119

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000101910 Gm28691 predicted gene 28691 -3.0000 0.3629
51075 ENSMUSG00000101804 Gm28813 predicted gene 28813 -3.0000 0.3629
51074 ENSMUSG00000101465 Gm29190 predicted gene 29190 -3.0000 0.1425
51073 ENSMUSG00000101422 Gm29301 predicted gene 29301 -3.0000 0.3629
51072 ENSMUSG00000099921 Gm28971 predicted gene 28971 -3.0000 0.3629
51071 ENSMUSG00000099554 Gm28259 predicted gene 28259 -3.0000 0.3629
51070 ENSMUSG00000092745 Mir5122 microRNA 5122 -3.0000 0.3629
51069 ENSMUSG00000097971 Gm26917 predicted gene, 26917 -2.9936 0.0000
51068 ENSMUSG00000105361 AY036118 cDNA sequence AY036118 -2.9541 0.0000
51067 ENSMUSG00000100862 Gm10925 predicted gene 10925 -2.9496 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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