SHOGoiN Cell Methylome: GSM1370543

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370543


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M21Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109539 Gm44667 predicted gene 44667 3.7004 0.0000
2 ENSMUSG00000104318 Pcdha7 Protocadherin alpha-7 3.4594 0.0000
3 ENSMUSG00000101818 Gm28269 NA 3.1699 0.0000
4 ENSMUSG00000098114 Gm26957 predicted gene, 26957 3.0000 0.0000
5 ENSMUSG00000071753 C230004F18Rik RIKEN cDNA C230004F18 gene 2.3219 0.0027
6 ENSMUSG00000108512 Gm7238 predicted gene 7238 2.3219 0.0027
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 2.0000 0.0119
8 ENSMUSG00000047728 BC025446 cDNA sequence BC025446 2.0000 0.0119
9 ENSMUSG00000054640 Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 2.0000 0.0119
10 ENSMUSG00000081577 Gm13455 predicted gene 13455 2.0000 0.0119

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000070552 Mrgprx1 Mas-related G-protein coupled receptor member X1 -2.2034 0.0049
50997 ENSMUSG00000074359 Psg23 NA -2.1962 0.2117
50996 ENSMUSG00000110203 Gm45365 predicted gene 45365 -2.1699 0.6942
50995 ENSMUSG00000100131 Gm28439 predicted gene 28439 -2.1355 0.0000
50994 ENSMUSG00000094127 G530012D18Rik NA -2.1240 0.0623
50993 ENSMUSG00000083563 Gm13340 predicted gene 13340 -2.0964 0.0000
50992 ENSMUSG00000106846 Gm42786 predicted gene 42786 -2.0850 0.3629
50991 ENSMUSG00000102615 Gm37844 predicted gene, 37844 -2.0519 0.0000
50990 ENSMUSG00000082884 Gm13339 predicted gene 13339 -2.0313 0.0000
50989 ENSMUSG00000068167 Csnka2ip Casein kinase II subunit alpha'-interacting protein -2.0192 0.0117

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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