SHOGoiN Cell Methylome: GSM1370546

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370546


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M24Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.8122 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 2.8074 0.0008
3 ENSMUSG00000040132 Svs2 seminal vesicle secretory protein 2 2.3219 0.0089
4 ENSMUSG00000075137 Olfr1163 NA 2.3219 0.0089
5 ENSMUSG00000077971 Gm26259 predicted gene, 26259 2.3219 0.0089
6 ENSMUSG00000083094 Gm4908 predicted gene 4908 2.3219 0.0089
7 ENSMUSG00000083166 Gm8648 predicted gene 8648 2.3219 0.0089
8 ENSMUSG00000084479 Gm26424 predicted gene, 26424 2.3219 0.0089
9 ENSMUSG00000085757 Tslrn1 testis specific long noncoding RNA 1 2.3219 0.0001
10 ENSMUSG00000087815 Gm22491 predicted gene, 22491 2.3219 0.0089

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000111242 Gm8155 predicted gene 8155 -2.8074 0.1869
50997 ENSMUSG00000110909 B020014A21Rik RIKEN cDNA B020014A21 gene -2.8074 0.1869
50996 ENSMUSG00000100938 Gm28726 predicted gene 28726 -2.8074 0.1869
50995 ENSMUSG00000100920 Gm18348 predicted gene, 18348 -2.8074 0.1869
50994 ENSMUSG00000083248 Gm6574 predicted gene 6574 -2.8074 0.0233
50993 ENSMUSG00000073929 Trim30e-ps1 tripartite motif-containing 30E, pseudogene 1 -2.8074 0.0233
50992 ENSMUSG00000067229 Cyp2c66 cytochrome P450, family 2, subfamily c, polypeptide 66 -2.8074 0.0128
50991 ENSMUSG00000043091 Tuba1c tubulin, alpha 1C -2.8074 0.1869
50990 ENSMUSG00000048483 Zdhhc22 zinc finger, DHHC-type containing 22 -2.7925 0.0002
50989 ENSMUSG00000107645 Olfr1380 NA -2.7297 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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