SHOGoiN Cell Methylome: GSM1370555

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370555


Profile download
9060100-715Sequence Read ArchiveSRP041257SRP041257_M25Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.0000 0.0000
2 ENSMUSG00000112452 NA 3.4594 0.0034
3 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.0000 0.0209
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.0000 0.0000
5 ENSMUSG00000083238 Hspe1-ps4 heat shock protein 1 (chaperonin 10), pseudogene 4 2.8555 0.0000
6 ENSMUSG00000036938 Try5 trypsin 5 2.8074 0.0387
7 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.8074 0.0387
8 ENSMUSG00000101242 Gm28319 predicted gene 28319 2.8074 0.0387
9 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6326 0.0000
10 ENSMUSG00000044454 Olfr867 olfactory receptor 867 2.5850 0.0724

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000099554 Gm28259 predicted gene 28259 -3.4594 0.0003
51075 ENSMUSG00000099494 Gm28197 predicted gene 28197 -3.4594 0.0000
51074 ENSMUSG00000037217 Syn1 synapsin I -3.4594 0.0003
51073 ENSMUSG00000106106 NA -3.4255 0.0000
51072 ENSMUSG00000099896 Gm29278 predicted gene 29278 -3.3923 0.0000
51071 ENSMUSG00000099520 Gm29061 predicted gene 29061 -3.3923 0.0000
51070 ENSMUSG00000073878 Gm13304 predicted gene 13304 -3.3923 0.0000
51069 ENSMUSG00000097971 Gm26917 predicted gene, 26917 -3.3861 0.0000
51068 ENSMUSG00000102195 Gm38168 predicted gene, 38168 -3.3219 0.0000
51067 ENSMUSG00000101802 Gm29445 predicted gene 29445 -3.3219 0.0006

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...