SHOGoiN Cell Methylome: GSM1370555

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370555


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M25Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 NA 5.0000 0.0000
2 ENSMUSG00000112452 Gm48075 predicted gene, 48075 3.4594 0.0034
3 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.0000 0.0209
4 ENSMUSG00000109354 Olfr706 NA 3.0000 0.0000
5 ENSMUSG00000083238 Hspe1-ps4 heat shock protein 1 (chaperonin 10), pseudogene 4 2.8555 0.0000
6 ENSMUSG00000036938 Try5 NA 2.8074 0.0387
7 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.8074 0.0387
8 ENSMUSG00000101242 Gm28319 predicted gene 28319 2.8074 0.0387
9 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6326 0.0000
10 ENSMUSG00000044454 Olfr867 Olfactory receptor 867 2.5850 0.0724

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000099800 Gm28570 predicted gene 28570 -2.3219 0.0366
50997 ENSMUSG00000098852 Gm27392 predicted gene, 27392 -2.3219 0.0366
50996 ENSMUSG00000093998 Gm26500 predicted gene, 26500 -2.3219 0.0013
50995 ENSMUSG00000082278 Gm13471 predicted gene 13471 -2.3219 0.0366
50994 ENSMUSG00000078668 Gm11595 NA -2.3219 0.0366
50993 ENSMUSG00000078508 Gm13128 NA -2.3219 0.0366
50992 ENSMUSG00000068151 A230006K03Rik RIKEN cDNA A230006K03 gene -2.3219 0.0366
50991 ENSMUSG00000026109 Tmeff2 Tomoregulin-2 -2.3118 0.0000
50990 ENSMUSG00000026456 Cyb5r1 cytochrome b5 reductase 1 -2.3101 0.0000
50989 ENSMUSG00000048745 Olfr820 NA -2.3074 0.0004

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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