SHOGoiN Cell Methylome: GSM1370557

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370557


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M27Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 NA 4.7004 0.0000
2 ENSMUSG00000109354 Olfr706 NA 4.7004 0.0000
3 ENSMUSG00000105523 Gm43193 predicted gene 43193 3.3907 0.0000
4 ENSMUSG00000089241 Gm24057 predicted gene, 24057 3.1699 0.0001
5 ENSMUSG00000106742 Gm42474 predicted gene 42474 2.8074 0.0009
6 ENSMUSG00000033096 Apmap Adipocyte plasma membrane-associated protein 2.6610 0.0000
7 ENSMUSG00000086407 Gm14123 NA 2.6610 0.0000
8 ENSMUSG00000015242 Nipsnap3a NA 2.6474 0.0000
9 ENSMUSG00000072972 Adam4 a disintegrin and metallopeptidase domain 4 2.5850 0.0028
10 ENSMUSG00000082010 Olfr1171-ps1 olfactory receptor 1171, pseudogene 1 2.5850 0.0028

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000028282 Casp8ap2 CASP8-associated protein 2 -2.4151 0.0000
50997 ENSMUSG00000051149 Adnp Activity-dependent neuroprotector homeobox protein -2.4032 0.0000
50996 ENSMUSG00000089705 Gm15970 predicted gene 15970 -2.4018 0.0000
50995 ENSMUSG00000033530 Ttc7b tetratricopeptide repeat domain 7B -2.3711 0.0000
50994 ENSMUSG00000022867 Usp25 ubiquitin specific peptidase 25 -2.3699 0.0000
50993 ENSMUSG00000043445 Pgp Glycerol-3-phosphate phosphatase -2.3685 0.0000
50992 ENSMUSG00000027134 Lpcat4 Lysophospholipid acyltransferase LPCAT4 -2.3675 0.0000
50991 ENSMUSG00000109945 Gm45601 predicted gene 45601 -2.3219 0.3191
50990 ENSMUSG00000109726 Gm45638 predicted gene 45638 -2.3219 0.1170
50989 ENSMUSG00000108348 Gm42372 PNMA family member 8C -2.3219 0.3191

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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