SHOGoiN Cell Methylome: GSM1370557

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370557


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M27Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.7004 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.7004 0.0000
3 ENSMUSG00000105523 Gm43193 predicted gene 43193 3.3907 0.0000
4 ENSMUSG00000089241 Gm24057 predicted gene, 24057 3.1699 0.0001
5 ENSMUSG00000106742 Gm42474 predicted gene 42474 2.8074 0.0009
6 ENSMUSG00000033096 Apmap adipocyte plasma membrane associated protein 2.6610 0.0000
7 ENSMUSG00000086407 Gm14123 predicted gene 14123 2.6610 0.0000
8 ENSMUSG00000015242 Nipsnap3a nipsnap homolog 3A 2.6474 0.0000
9 ENSMUSG00000072972 Adam4 a disintegrin and metallopeptidase domain 4 2.5850 0.0028
10 ENSMUSG00000082010 Olfr1171-ps1 olfactory receptor 1171, pseudogene 1 2.5850 0.0028

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000065559 Mir206 microRNA 206 -3.5850 0.0225
51075 ENSMUSG00000100452 Gm29628 predicted gene 29628 -3.5236 0.0051
51074 ENSMUSG00000089609 Gm22095 predicted gene, 22095 -3.5236 0.0051
51073 ENSMUSG00000110609 Gm7948 predicted gene 7948 -3.4594 0.0375
51072 ENSMUSG00000103681 Gm37130 predicted gene, 37130 -3.4594 0.0048
51071 ENSMUSG00000100938 Gm28726 predicted gene 28726 -3.4594 0.0375
51070 ENSMUSG00000100928 Gm28487 predicted gene 28487 -3.4594 0.0375
51069 ENSMUSG00000100446 Gm28242 predicted gene 28242 -3.4594 0.0007
51068 ENSMUSG00000089043 Gm24359 predicted gene, 24359 -3.4594 0.0375
51067 ENSMUSG00000101785 Gm28702 predicted gene 28702 -3.3219 0.0652

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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