SHOGoiN Cell Methylome: GSM1370558

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370558


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M28Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109539 Gm44667 predicted gene 44667 3.4594 0.0002
2 ENSMUSG00000020620 Abca8b ATP-binding cassette, sub-family A (ABC1), member 8b 2.6455 0.0000
3 ENSMUSG00000069390 Olfr707 olfactory receptor 707 2.6240 0.0000
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.6240 0.0000
5 ENSMUSG00000017688 Hnf4g hepatocyte nuclear factor 4, gamma 2.5850 0.0002
6 ENSMUSG00000082971 Gm13517 predicted gene 13517 2.5850 0.0152
7 ENSMUSG00000098114 Gm26957 predicted gene, 26957 2.5850 0.0152
8 ENSMUSG00000107957 Gm44088 predicted gene, 44088 2.5000 0.0002
9 ENSMUSG00000027209 Fam227b family with sequence similarity 227, member B 2.3219 0.0000
10 ENSMUSG00000029281 Smr2 submaxillary gland androgen regulated protein 2 2.3219 0.0352

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000112884 NA -3.1699 0.0119
51075 ENSMUSG00000107325 Gm43425 predicted gene 43425 -3.1699 0.0119
51074 ENSMUSG00000101440 Gm29425 predicted gene 29425 -3.1699 0.0006
51073 ENSMUSG00000099548 Gm29220 predicted gene 29220 -3.1699 0.0119
51072 ENSMUSG00000095305 Gm23790 predicted gene, 23790 -3.1699 0.0006
51071 ENSMUSG00000089609 Gm22095 predicted gene, 22095 -3.1699 0.0119
51070 ENSMUSG00000100131 Gm28439 predicted gene 28439 -3.0047 0.0000
51069 ENSMUSG00000101967 Gm29555 predicted gene 29555 -3.0000 0.0217
51068 ENSMUSG00000101949 Gm5370 predicted gene 5370 -3.0000 0.0217
51067 ENSMUSG00000101512 Gm28135 predicted gene 28135 -3.0000 0.0217

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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