SHOGoiN Cell Methylome: GSM1370560

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370560


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M30Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 5.1293 0.0000
2 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.8074 0.0000
3 ENSMUSG00000107135 Gm43806 predicted gene 43806 2.8074 0.0000
4 ENSMUSG00000104083 Gm29739 predicted gene, 29739 2.5850 0.0001
5 ENSMUSG00000110158 Gm45690 predicted gene 45690 2.5850 0.0001
6 ENSMUSG00000072574 Gm17184 predicted gene 17184 2.3219 0.0007
7 ENSMUSG00000084441 Gm26255 predicted gene, 26255 2.3219 0.0007
8 ENSMUSG00000085122 4933404K08Rik RIKEN cDNA 4933404K08 gene 2.3219 0.0000
9 ENSMUSG00000091466 Gm17183 predicted gene 17183 2.3219 0.0007
10 ENSMUSG00000106469 C030015E24Rik RIKEN cDNA C030015E24 gene 2.3219 0.0007

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000101204 Gm29271 predicted gene 29271 -3.4594 0.2416
51075 ENSMUSG00000100805 Gm29108 predicted gene 29108 -3.4594 0.3837
51074 ENSMUSG00000099785 Gm28425 predicted gene 28425 -3.4534 0.0158
51073 ENSMUSG00000109439 Gm44853 predicted gene 44853 -3.3219 0.3714
51072 ENSMUSG00000101804 Gm28813 predicted gene 28813 -3.3219 0.3714
51071 ENSMUSG00000101531 Gm29672 predicted gene 29672 -3.3219 0.2195
51070 ENSMUSG00000100401 Gm29248 predicted gene 29248 -3.3219 0.3714
51069 ENSMUSG00000081897 Gm15067 predicted gene 15067 -3.3219 0.3714
51068 ENSMUSG00000101249 Gm29216 predicted gene 29216 -3.2833 0.0000
51067 ENSMUSG00000067736 Gm10222 predicted gene 10222 -3.2760 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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